RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Nwd2Q6P5U7 1742 aa27.86■■■□□ 2.05
Cln6-201ENSMUST00000034776 Vwa3bJ9JI28 736 aa27.86■■■□□ 2.05
Cln6-201ENSMUST00000034776 Neurod6P48986 337 aa27.86■■■□□ 2.05
Cln6-201ENSMUST00000034776 Top1mtQ8R4U6 593 aa27.86■■■□□ 2.05
Cln6-201ENSMUST00000034776 Il1rapl2Q9ERS6 686 aa27.86■■■□□ 2.05
Cln6-201ENSMUST00000034776 Arap2Q8BZ05 1703 aa27.85■■■□□ 2.05
Cln6-201ENSMUST00000034776 Tmc2Q8R4P4 888 aa27.85■■■□□ 2.05
Cln6-201ENSMUST00000034776 Psrc1Q9D0P7 329 aa27.85■■■□□ 2.05
Cln6-201ENSMUST00000034776 Ddb1Q3U1J4 1140 aaKnown RBP27.84■■■□□ 2.05
Cln6-201ENSMUST00000034776 Rbm27Q5SFM8 1060 aaKnown RBP27.83■■■□□ 2.05
Cln6-201ENSMUST00000034776 NfkbibQ60778 359 aa27.83■■■□□ 2.05
Cln6-201ENSMUST00000034776 Ric1Q69ZJ7 1422 aa27.83■■■□□ 2.05
Cln6-201ENSMUST00000034776 Clca2Q8BG22 942 aa27.82■■■□□ 2.04
Cln6-201ENSMUST00000034776 Zkscan1Q8BGS3 561 aaKnown RBP27.82■■■□□ 2.04
Cln6-201ENSMUST00000034776 Add2Q9QYB8 725 aa27.82■■■□□ 2.04
Cln6-201ENSMUST00000034776 Ddx11Q6AXC6 880 aa27.81■■■□□ 2.04
Cln6-201ENSMUST00000034776 Fam102bQ8BQS4 339 aa27.81■■■□□ 2.04
Cln6-201ENSMUST00000034776 Ttc19Q8CC21 365 aa27.81■■■□□ 2.04
Cln6-201ENSMUST00000034776 Zbtb1Q91VL9 713 aa27.81■■■□□ 2.04
Cln6-201ENSMUST00000034776 Adam1aQ60813 791 aa27.8■■■□□ 2.04
Cln6-201ENSMUST00000034776 Abca3Q8R420 1704 aa27.8■■■□□ 2.04
Cln6-201ENSMUST00000034776 Phactr2B1AVP0 632 aa27.8■■■□□ 2.04
Cln6-201ENSMUST00000034776 Ccdc7Q9D541 371 aa27.8■■■□□ 2.04
Cln6-201ENSMUST00000034776 Ssc5dQ8BV57 1371 aa27.8■■■□□ 2.04
Cln6-201ENSMUST00000034776 Cacna1sQ02789 1880 aa27.79■■■□□ 2.04
Cln6-201ENSMUST00000034776 Eya2O08575 532 aa27.79■■■□□ 2.04
Cln6-201ENSMUST00000034776 Hspa1lP16627 641 aa27.79■■■□□ 2.04
Cln6-201ENSMUST00000034776 Cyp19a1P28649 503 aa27.79■■■□□ 2.04
Cln6-201ENSMUST00000034776 Ifit2Q64112 472 aa27.79■■■□□ 2.04
Cln6-201ENSMUST00000034776 Pdzrn3Q69ZS0 1063 aa27.79■■■□□ 2.04
Cln6-201ENSMUST00000034776 EvcP57680 1005 aa27.79■■■□□ 2.04
Cln6-201ENSMUST00000034776 Utp18Q5SSI6 552 aaKnown RBP27.79■■■□□ 2.04
Cln6-201ENSMUST00000034776 Nlrp3Q8R4B8 1033 aa27.79■■■□□ 2.04
Cln6-201ENSMUST00000034776 Casz1Q9CWL2 1761 aa27.79■■■□□ 2.04
Cln6-201ENSMUST00000034776 Ssh1Q76I79 1042 aa27.78■■■□□ 2.04
Cln6-201ENSMUST00000034776 Ciao1Q99KN2 339 aa27.78■■■□□ 2.04
Cln6-201ENSMUST00000034776 Slc5a4bQ91ZP4 660 aa27.77■■■□□ 2.04
Cln6-201ENSMUST00000034776 Plcb3P51432 1234 aaKnown RBP27.77■■■□□ 2.04
Cln6-201ENSMUST00000034776 Ubxn10Q8BG34 277 aa27.77■■■□□ 2.04
Cln6-201ENSMUST00000034776 Rrs1Q9CYH6 365 aaKnown RBP27.77■■■□□ 2.04
Cln6-201ENSMUST00000034776 Col22a1E9Q7P1 1613 aa27.77■■■□□ 2.04
Cln6-201ENSMUST00000034776 Smarce1O54941 411 aaKnown RBP27.76■■■□□ 2.03
Cln6-201ENSMUST00000034776 Ccdc9Q8VC31 543 aaKnown RBP27.76■■■□□ 2.03
Cln6-201ENSMUST00000034776 Fkbp1aP26883 108 aaKnown RBP27.76■■■□□ 2.03
Cln6-201ENSMUST00000034776 Slx4ipQ9D7Y9 413 aa27.76■■■□□ 2.03
Cln6-201ENSMUST00000034776 Greb1lB9EJV3 1913 aa27.75■■■□□ 2.03
Cln6-201ENSMUST00000034776 Rbbp8nlA2ABX0 614 aa27.75■■■□□ 2.03
Cln6-201ENSMUST00000034776 DiexfQ8BTT6 772 aaKnown RBP27.75■■■□□ 2.03
Cln6-201ENSMUST00000034776 Igflr1Q3U4N7 345 aa27.74■■■□□ 2.03
Cln6-201ENSMUST00000034776 Atp6v1dP57746 247 aa27.74■■■□□ 2.03
Cln6-201ENSMUST00000034776 KinQ8K339 391 aa27.74■■■□□ 2.03
Cln6-201ENSMUST00000034776 Chmp3Q9CQ10 224 aa27.74■■■□□ 2.03
Cln6-201ENSMUST00000034776 Mdm2P23804 489 aa27.73■■■□□ 2.03
Cln6-201ENSMUST00000034776 Timm10P62073 90 aa27.73■■■□□ 2.03
Cln6-201ENSMUST00000034776 Filip1lQ6P6L0 1131 aa27.73■■■□□ 2.03
Cln6-201ENSMUST00000034776 Ggt6Q6PDE7 497 aa27.73■■■□□ 2.03
Cln6-201ENSMUST00000034776 Ints3Q7TPD0 1041 aaKnown RBP27.73■■■□□ 2.03
Cln6-201ENSMUST00000034776 GptQ8QZR5 496 aa27.73■■■□□ 2.03
Cln6-201ENSMUST00000034776 Gsdma2Q32M21 443 aa27.72■■■□□ 2.03
Cln6-201ENSMUST00000034776 Vps54Q5SPW0 977 aa27.72■■■□□ 2.03
Cln6-201ENSMUST00000034776 Strn4P58404 760 aa27.71■■■□□ 2.03
Cln6-201ENSMUST00000034776 Bloc1s4Q8VED2 215 aa27.71■■■□□ 2.03
Cln6-201ENSMUST00000034776 Prr5lA2AVJ5 370 aa27.71■■■□□ 2.03
Cln6-201ENSMUST00000034776 Kcnb2A6H8H5 907 aa27.71■■■□□ 2.03
Cln6-201ENSMUST00000034776 Sf3b2Q3UJB0 878 aaKnown RBP27.71■■■□□ 2.03
Cln6-201ENSMUST00000034776 Ak2Q9WTP6 239 aa27.71■■■□□ 2.03
Cln6-201ENSMUST00000034776 Gjb2Q00977 226 aa27.7■■■□□ 2.03
Cln6-201ENSMUST00000034776 Rbm8a2A0A0N4SUH6 174 aa27.7■■■□□ 2.02
Cln6-201ENSMUST00000034776 Nol10Q5RJG1 687 aaKnown RBP27.7■■■□□ 2.02
Cln6-201ENSMUST00000034776 ZyxQ62523 564 aa27.7■■■□□ 2.02
Cln6-201ENSMUST00000034776 Rbm8aQ9CWZ3 174 aa27.7■■■□□ 2.02
Cln6-201ENSMUST00000034776 Rapgef4Q9EQZ6 1011 aa27.7■■■□□ 2.02
Cln6-201ENSMUST00000034776 Cops6O88545 324 aa27.69■■■□□ 2.02
Cln6-201ENSMUST00000034776 Mctp2Q5RJH2 878 aa27.69■■■□□ 2.02
Cln6-201ENSMUST00000034776 Asap2Q7SIG6 958 aa27.69■■■□□ 2.02
Cln6-201ENSMUST00000034776 Bmp2kQ91Z96 1138 aa27.69■■■□□ 2.02
Cln6-201ENSMUST00000034776 Zdhhc9P59268 364 aa27.68■■■□□ 2.02
Cln6-201ENSMUST00000034776 Sgsm2Q80U12 1005 aa27.68■■■□□ 2.02
Cln6-201ENSMUST00000034776 Dmrt2Q8BG36 561 aa27.68■■■□□ 2.02
Cln6-201ENSMUST00000034776 Myh1Q5SX40 1942 aa27.68■■■□□ 2.02
Cln6-201ENSMUST00000034776 Plcb2A3KGF7 1181 aa27.68■■■□□ 2.02
Cln6-201ENSMUST00000034776 Tmem266Q8BZB3 538 aa27.68■■■□□ 2.02
Cln6-201ENSMUST00000034776 Bag4Q8CI61 457 aa27.68■■■□□ 2.02
Cln6-201ENSMUST00000034776 MecomP14404 1042 aa27.67■■■□□ 2.02
Cln6-201ENSMUST00000034776 Ncoa5Q91W39 579 aaKnown RBP27.67■■■□□ 2.02
Cln6-201ENSMUST00000034776 Foxo4Q9WVH3 505 aa27.67■■■□□ 2.02
Cln6-201ENSMUST00000034776 Klc3Q91W40 508 aa27.67■■■□□ 2.02
Cln6-201ENSMUST00000034776 StrbpQ91WM1 672 aaKnown RBP27.67■■■□□ 2.02
Cln6-201ENSMUST00000034776 Ankrd31A0A140LI88 1765 aa27.67■■■□□ 2.02
Cln6-201ENSMUST00000034776 Nphp3Q7TNH6 1325 aa27.66■■■□□ 2.02
Cln6-201ENSMUST00000034776 Zbtb38Q3LR78 1197 aa27.66■■■□□ 2.02
Cln6-201ENSMUST00000034776 BcanQ61361 883 aa27.66■■■□□ 2.02
Cln6-201ENSMUST00000034776 Ddx19aQ61655 478 aaKnown RBP27.66■■■□□ 2.02
Cln6-201ENSMUST00000034776 Miga2Q8BK03 593 aa27.66■■■□□ 2.02
Cln6-201ENSMUST00000034776 Eno4Q8C042 619 aa27.66■■■□□ 2.02
Cln6-201ENSMUST00000034776 Gdpd2Q9ESM6 539 aa27.66■■■□□ 2.02
Cln6-201ENSMUST00000034776 Prr29B1ARI9 187 aa27.65■■■□□ 2.02
Cln6-201ENSMUST00000034776 PtmsQ9D0J8 101 aaKnown RBP27.65■■■□□ 2.02
Cln6-201ENSMUST00000034776 Chmp4cQ9D7F7 232 aa27.65■■■□□ 2.02
Cln6-201ENSMUST00000034776 PhaxQ9JJT9 385 aaKnown RBP27.65■■■□□ 2.02
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms