RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Casq1O09165 405 aa24.72■■□□□ 1.55
Trim47-201ENSMUST00000021120 Vars2Q3U2A8 1060 aa24.72■■□□□ 1.55
Trim47-201ENSMUST00000021120 Aldh8a1Q8BH00 487 aa24.72■■□□□ 1.55
Trim47-201ENSMUST00000021120 Mrc1Q61830 1456 aa24.72■■□□□ 1.55
Trim47-201ENSMUST00000021120 Ier5O89113 308 aa24.71■■□□□ 1.55
Trim47-201ENSMUST00000021120 Tpm2P58774 284 aa24.71■■□□□ 1.55
Trim47-201ENSMUST00000021120 Bag4Q8CI61 457 aa24.71■■□□□ 1.55
Trim47-201ENSMUST00000021120 Ssc5dQ8BV57 1371 aa24.71■■□□□ 1.55
Trim47-201ENSMUST00000021120 Strn4P58404 760 aa24.71■■□□□ 1.55
Trim47-201ENSMUST00000021120 Adam1aQ60813 791 aa24.71■■□□□ 1.55
Trim47-201ENSMUST00000021120 MpndQ3TV65 487 aa24.7■■□□□ 1.55
Trim47-201ENSMUST00000021120 DekQ7TNV0 380 aaKnown RBP24.7■■□□□ 1.55
Trim47-201ENSMUST00000021120 Ehd4Q9EQP2 541 aa24.7■■□□□ 1.55
Trim47-201ENSMUST00000021120 Arap2Q8BZ05 1703 aa24.7■■□□□ 1.54
Trim47-201ENSMUST00000021120 Lrrc43Q3V0L5 667 aa24.7■■□□□ 1.54
Trim47-201ENSMUST00000021120 Esco1Q69Z69 843 aa24.7■■□□□ 1.54
Trim47-201ENSMUST00000021120 Bloc1s4Q8VED2 215 aa24.7■■□□□ 1.54
Trim47-201ENSMUST00000021120 Slf2Q6P9P0 1278 aa24.69■■□□□ 1.54
Trim47-201ENSMUST00000021120 GorabQ8BRM2 368 aa24.69■■□□□ 1.54
Trim47-201ENSMUST00000021120 Dmrtc1Q9D9R7 182 aa24.69■■□□□ 1.54
Trim47-201ENSMUST00000021120 Snapc4Q8BP86 1333 aa24.68■■□□□ 1.54
Trim47-201ENSMUST00000021120 Zfp91Q62511 572 aa24.68■■□□□ 1.54
Trim47-201ENSMUST00000021120 Slc4a10Q5DTL9 1118 aa24.67■■□□□ 1.54
Trim47-201ENSMUST00000021120 Eif4g2Q62448 906 aaKnown RBP24.67■■□□□ 1.54
Trim47-201ENSMUST00000021120 Nphp1Q9QY53 687 aa24.67■■□□□ 1.54
Trim47-201ENSMUST00000021120 Dhx16G3X8X0 1044 aaKnown RBP24.66■■□□□ 1.54
Trim47-201ENSMUST00000021120 Mmp8O70138 465 aa24.66■■□□□ 1.54
Trim47-201ENSMUST00000021120 Tgfb1i1Q62219 461 aa24.66■■□□□ 1.54
Trim47-201ENSMUST00000021120 Hmgb2P30681 210 aaKnown RBP24.66■■□□□ 1.54
Trim47-201ENSMUST00000021120 Gnat3Q3V3I2 354 aa24.66■■□□□ 1.54
Trim47-201ENSMUST00000021120 Pim2Q62070 370 aa24.66■■□□□ 1.54
Trim47-201ENSMUST00000021120 Fam213aQ9CYH2 218 aa24.65■■□□□ 1.54
Trim47-201ENSMUST00000021120 Gcc1Q9D4H2 778 aa24.65■■□□□ 1.54
Trim47-201ENSMUST00000021120 Fkbp1aP26883 108 aaKnown RBP24.65■■□□□ 1.54
Trim47-201ENSMUST00000021120 Trip6Q9Z1Y4 480 aa24.65■■□□□ 1.54
Trim47-201ENSMUST00000021120 ImpactO55091 318 aa24.63■■□□□ 1.53
Trim47-201ENSMUST00000021120 Mcm2P97310 904 aa24.63■■□□□ 1.53
Trim47-201ENSMUST00000021120 GpkowQ56A08 488 aa24.63■■□□□ 1.53
Trim47-201ENSMUST00000021120 Nlrp9bQ66X22 1003 aa24.63■■□□□ 1.53
Trim47-201ENSMUST00000021120 Ppip5k2Q6ZQB6 1129 aa24.63■■□□□ 1.53
Trim47-201ENSMUST00000021120 Ankrd31A0A140LI88 1765 aa24.63■■□□□ 1.53
Trim47-201ENSMUST00000021120 InsrrQ9WTL4 1300 aa24.63■■□□□ 1.53
Trim47-201ENSMUST00000021120 Zkscan1Q8BGS3 561 aaKnown RBP24.62■■□□□ 1.53
Trim47-201ENSMUST00000021120 Trim34aQ99PP6 485 aa24.62■■□□□ 1.53
Trim47-201ENSMUST00000021120 Casz1Q9CWL2 1761 aa24.62■■□□□ 1.53
Trim47-201ENSMUST00000021120 Atp1b3P97370 278 aa24.62■■□□□ 1.53
Trim47-201ENSMUST00000021120 HmcesQ8R1M0 353 aaKnown RBP24.62■■□□□ 1.53
Trim47-201ENSMUST00000021120 RtcbQ99LF4 505 aaKnown RBP24.62■■□□□ 1.53
Trim47-201ENSMUST00000021120 Ppp6r3Q922D4 844 aa24.61■■□□□ 1.53
Trim47-201ENSMUST00000021120 FanclQ9CR14 375 aa24.61■■□□□ 1.53
Trim47-201ENSMUST00000021120 Pdcl2Q78Y63 240 aa24.61■■□□□ 1.53
Trim47-201ENSMUST00000021120 Ttc19Q8CC21 365 aa24.61■■□□□ 1.53
Trim47-201ENSMUST00000021120 VgfQ0VGU4 617 aa24.6■■□□□ 1.53
Trim47-201ENSMUST00000021120 Smc4Q8CG47 1286 aa24.6■■□□□ 1.53
Trim47-201ENSMUST00000021120 NgdnQ9DB96 315 aaKnown RBP24.6■■□□□ 1.53
Trim47-201ENSMUST00000021120 Adamtsl1Q8BLI0 1745 aa24.6■■□□□ 1.53
Trim47-201ENSMUST00000021120 Ifit1bl2Q3U687 466 aa24.59■■□□□ 1.53
Trim47-201ENSMUST00000021120 NexnQ7TPW1 607 aa24.59■■□□□ 1.53
Trim47-201ENSMUST00000021120 Dpf1Q9QX66 387 aa24.59■■□□□ 1.53
Trim47-201ENSMUST00000021120 Col22a1E9Q7P1 1613 aa24.59■■□□□ 1.53
Trim47-201ENSMUST00000021120 Nucb1Q02819 459 aaKnown RBP24.59■■□□□ 1.53
Trim47-201ENSMUST00000021120 Rasa1E9PYG6 1038 aa24.58■■□□□ 1.53
Trim47-201ENSMUST00000021120 Smarca5Q91ZW3 1051 aaKnown RBP24.58■■□□□ 1.53
Trim47-201ENSMUST00000021120 Mcmdc2E9Q956 681 aa24.58■■□□□ 1.52
Trim47-201ENSMUST00000021120 Cyp19a1P28649 503 aa24.58■■□□□ 1.52
Trim47-201ENSMUST00000021120 Snai1Q02085 264 aa24.58■■□□□ 1.52
Trim47-201ENSMUST00000021120 SowahdQ8BY98 327 aa24.58■■□□□ 1.52
Trim47-201ENSMUST00000021120 GptQ8QZR5 496 aa24.57■■□□□ 1.52
Trim47-201ENSMUST00000021120 Myh1Q5SX40 1942 aa24.57■■□□□ 1.52
Trim47-201ENSMUST00000021120 Pa2g4P50580 394 aaKnown RBP24.56■■□□□ 1.52
Trim47-201ENSMUST00000021120 Igflr1Q3U4N7 345 aa24.56■■□□□ 1.52
Trim47-201ENSMUST00000021120 Adora1Q60612 326 aa24.56■■□□□ 1.52
Trim47-201ENSMUST00000021120 Clca2Q8BG22 942 aa24.56■■□□□ 1.52
Trim47-201ENSMUST00000021120 Atg4a-psA0A0G2JFS9 396 aa24.55■■□□□ 1.52
Trim47-201ENSMUST00000021120 Ccdc146E9Q9F7 977 aa24.55■■□□□ 1.52
Trim47-201ENSMUST00000021120 Pdia3P27773 505 aaKnown RBP24.55■■□□□ 1.52
Trim47-201ENSMUST00000021120 Atg4aQ8C9S8 396 aa24.55■■□□□ 1.52
Trim47-201ENSMUST00000021120 Mapk8ip1Q9WVI9 707 aa24.55■■□□□ 1.52
Trim47-201ENSMUST00000021120 Ubr3Q5U430 1889 aa24.54■■□□□ 1.52
Trim47-201ENSMUST00000021120 Kiaa0232Q80U59 1396 aaKnown RBP24.54■■□□□ 1.52
Trim47-201ENSMUST00000021120 Fez1Q8K0X8 392 aa24.54■■□□□ 1.52
Trim47-201ENSMUST00000021120 PtmsQ9D0J8 101 aaKnown RBP24.54■■□□□ 1.52
Trim47-201ENSMUST00000021120 Rnf123Q5XPI3 1314 aa24.54■■□□□ 1.52
Trim47-201ENSMUST00000021120 Dctn1O08788 1281 aa24.54■■□□□ 1.52
Trim47-201ENSMUST00000021120 Tmem87bQ8BKU8 555 aa24.54■■□□□ 1.52
Trim47-201ENSMUST00000021120 Srp68Q8BMA6 625 aaKnown RBP24.53■■□□□ 1.52
Trim47-201ENSMUST00000021120 Cyp27a1Q9DBG1 533 aa24.53■■□□□ 1.52
Trim47-201ENSMUST00000021120 Greb1lB9EJV3 1913 aa24.53■■□□□ 1.52
Trim47-201ENSMUST00000021120 Plch1Q4KWH5 1682 aa24.53■■□□□ 1.52
Trim47-201ENSMUST00000021120 Cyp2c23E9Q5K4 494 aa24.53■■□□□ 1.52
Trim47-201ENSMUST00000021120 Cops6O88545 324 aa24.53■■□□□ 1.52
Trim47-201ENSMUST00000021120 Nol10Q5RJG1 687 aaKnown RBP24.53■■□□□ 1.52
Trim47-201ENSMUST00000021120 BcanQ61361 883 aa24.53■■□□□ 1.52
Trim47-201ENSMUST00000021120 Plcb3P51432 1234 aaKnown RBP24.52■■□□□ 1.52
Trim47-201ENSMUST00000021120 Abcc4E9Q236 1325 aa24.52■■□□□ 1.52
Trim47-201ENSMUST00000021120 Zc3h12cQ5DTV4 884 aa24.51■■□□□ 1.51
Trim47-201ENSMUST00000021120 Susd4Q8BH32 490 aa24.51■■□□□ 1.51
Trim47-201ENSMUST00000021120 Irf5P56477 497 aa24.51■■□□□ 1.51
Trim47-201ENSMUST00000021120 4931400O07RikQ9D4M5 137 aa24.51■■□□□ 1.51
Trim47-201ENSMUST00000021120 Zfyve9A2A8R0 1397 aa24.51■■□□□ 1.51
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms