RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 Glipr1l2Q9CQ35 332 aa13.68□□□□□ -0.22
Ddx56-201ENSMUST00000004507 4931400O07RikQ9D4M5 137 aa13.68□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Abcc4E9Q236 1325 aa13.68□□□□□ -0.22
Ddx56-201ENSMUST00000004507 PtmaP26350 111 aa13.67□□□□□ -0.22
Ddx56-201ENSMUST00000004507 GalcP54818 684 aa13.67□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Map3k2Q61083 619 aa13.67□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Slc39a6Q8C145 765 aa13.67□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Arhgap33Q80YF9 1305 aa13.67□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Gm9992B2RWK3 458 aa13.67□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Paxip1Q6NZQ4 1056 aa13.67□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Unc93aQ710D3 458 aa13.67□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Col4a1P02463 1669 aa13.66□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Map3k13Q1HKZ5 959 aa13.66□□□□□ -0.22
Ddx56-201ENSMUST00000004507 HellsQ60848 821 aa13.66□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Mlh1Q9JK91 760 aa13.66□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Syde2E9PUP1 1314 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Irf9Q61179 399 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Pde3bQ61409 1100 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Tgfb1i1Q62219 461 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 PogkQ80TC5 607 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Brf1Q8CFK2 676 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Slx4ipQ9D7Y9 413 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Stk3Q9JI10 497 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Ddx60E9PZQ1 1711 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Kndc1Q0KK55 1742 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Sos2Q02384 1333 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Bicdl1A0JNT9 577 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Mylk2Q8VCR8 613 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Chmp4cQ9D7F7 232 aa13.65□□□□□ -0.22
Ddx56-201ENSMUST00000004507 Elmsan1E9Q2I4 1089 aaKnown RBP13.64□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Igfbp6P47880 238 aa13.64□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Kiaa0232Q80U59 1396 aaKnown RBP13.64□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Gadd45bP22339 160 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Kif4P33174 1231 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Pde4dQ01063 747 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 VgfQ0VGU4 617 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Ddrgk1Q80WW9 315 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Q8BT18 775 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Kiaa0319lQ8K135 1048 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Ppfia1B2RXQ2 1266 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Gjb2Q00977 226 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Fam228bQ497Q6 232 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Gm12185Q5NCB2 835 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Top1mtQ8R4U6 593 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Rrp9Q91WM3 475 aaKnown RBP13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Taf5lQ91WQ5 589 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Add2Q9QYB8 725 aa13.63□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Ttll7A4Q9F0 912 aa13.62□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Rrp12Q6P5B0 1295 aaKnown RBP13.62□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Miga2Q8BK03 593 aa13.62□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Gripap1Q8VD04 806 aa13.62□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Zbtb3Q91X45 518 aa13.62□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Nphp3Q7TNH6 1325 aa13.62□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Syce3B5KM66 88 aa13.62□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Grm8P47743 908 aa13.62□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Pa2g4P50580 394 aaKnown RBP13.62□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Cpa2Q504N0 417 aa13.62□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Morc2aQ69ZX6 1030 aa13.62□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Bicc1Q99MQ1 977 aaKnown RBP13.62□□□□□ -0.23
Ddx56-201ENSMUST00000004507 EspnlQ3UYR4 1005 aa13.61□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Nip7Q9CXK8 180 aaKnown RBP13.61□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Rufy3Q9D394 469 aa13.6□□□□□ -0.23
Ddx56-201ENSMUST00000004507 1700006A11RikB9EHI3 544 aa13.6□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Cers3Q1A3B0 383 aa13.6□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Trim52Q8CDV4 233 aa13.6□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Cchcr1Q8K2I2 770 aa13.6□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Hspa2P17156 633 aa13.59□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Vars2Q3U2A8 1060 aa13.59□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Ifit2Q64112 472 aa13.59□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Ddx11Q6AXC6 880 aa13.59□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Sf3a1Q8K4Z5 791 aaKnown RBP13.59□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Ccar2Q8VDP4 922 aaKnown RBP13.59□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Zbtb1Q91VL9 713 aa13.59□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Erbb4Q61527 1308 aa13.59□□□□□ -0.23
Ddx56-201ENSMUST00000004507 Smarcc1P97496 1104 aa13.58□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Tti2Q8BGV4 512 aa13.58□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Kdm4aQ8BW72 1064 aa13.58□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Fez1Q8K0X8 392 aa13.58□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Pof1bQ8K4L4 587 aa13.58□□□□□ -0.24
Ddx56-201ENSMUST00000004507 MetP16056 1379 aa13.58□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Snapc4Q8BP86 1333 aa13.58□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Ankrd13dQ6PD24 605 aa13.58□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Ppm1mQ8BU27 406 aa13.58□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Gigyf1Q99MR1 1044 aaKnown RBP13.58□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Erich6bQ9D4S6 220 aa13.58□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Ric1Q69ZJ7 1422 aa13.57□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Mybbp1aQ7TPV4 1344 aaKnown RBP13.57□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Adamtsl1Q8BLI0 1745 aa13.57□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Syt1P46096 421 aa13.57□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Wdr93Q402B2 695 aa13.57□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Ankle2Q6P1H6 964 aa13.57□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Smc3Q9CW03 1217 aaKnown RBP13.57□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Lmbr1lQ9D1E5 489 aa13.57□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Zfp804bA0A0G2JGH6 1343 aa13.57□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Gm13023A2A8N2 498 aa13.56□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Dhx16G3X8X0 1044 aaKnown RBP13.56□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Slfnl1Q8BHW9 410 aa13.56□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Stx6Q9JKK1 255 aa13.56□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Rgs17Q9QZB0 210 aa13.56□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Kcnb2A6H8H5 907 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms