RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 CarsQ9ER72 831 aaKnown RBP18.25■□□□□ 0.51
Ercc1-201ENSMUST00000003645 IncenpQ9WU62 880 aa18.25■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Ambra1A2AH22 1300 aa18.25■□□□□ 0.51
Ercc1-201ENSMUST00000003645 LifrP42703 1092 aa18.24■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Cct4P80315 539 aaKnown RBP18.24■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Nol10Q5RJG1 687 aaKnown RBP18.24■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Sf3b3Q921M3 1217 aaKnown RBP18.24■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Emilin1Q99K41 1017 aa18.24■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Trpc5Q9QX29 975 aa18.24■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Prl3d3A0A0M6L0J6 224 aa18.23■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Aknad1E9Q8N6 675 aa18.23■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Wdhd1P59328 1117 aa18.23■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Jarid2Q62315 1234 aa18.23■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Aldh8a1Q8BH00 487 aa18.23■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Chrna2Q91X60 512 aa18.23■□□□□ 0.51
Ercc1-201ENSMUST00000003645 FanclQ9CR14 375 aa18.23■□□□□ 0.51
Ercc1-201ENSMUST00000003645 VirmaA2AIV2 1811 aaKnown RBP18.23■□□□□ 0.51
Ercc1-201ENSMUST00000003645 4931408C20RikE9PWP9 1381 aa18.23■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Itga6Q61739 1091 aa18.21■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Abcc4E9Q236 1325 aa18.21■□□□□ 0.51
Ercc1-201ENSMUST00000003645 Atg4a-psA0A0G2JFS9 396 aa18.2■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Sult6b1P0CC03 303 aa18.2■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Rbm27Q5SFM8 1060 aaKnown RBP18.2■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Wdr43Q6ZQL4 677 aaKnown RBP18.2■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Q8C5K5 320 aa18.2■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Atg4aQ8C9S8 396 aa18.2■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Zbtb3Q91X45 518 aa18.2■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Gja10Q9WUS4 505 aa18.2■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Togaram1Q6A070 1776 aaKnown RBP18.2■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Atg9aQ68FE2 551 aa18.19■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Smarca5Q91ZW3 1051 aaKnown RBP18.19■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Slc4a3P16283 1227 aa18.18■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Slc38a10Q5I012 1090 aa18.18■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Strip1Q8C079 837 aa18.18■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Supt16hQ920B9 1047 aa18.18■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Ciao1Q99KN2 339 aa18.18■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Znf609Q8BZ47 1413 aa18.18■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Brd1E9PZ26 1189 aaKnown RBP18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Eya2O08575 532 aa18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Snrpa1P57784 255 aaKnown RBP18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Eva1cP58659 440 aa18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Cgnl1Q6AW69 1298 aa18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Dhx38Q80X98 1228 aa18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Kif2cQ922S8 721 aa18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 St5Q924W7 1134 aa18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Gcc1Q9D4H2 778 aa18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Chmp5Q9D7S9 219 aa18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Kif13bA0A286YCV9 1847 aa18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Gpr182P43142 395 aa18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Ppp4r3aQ6P2K6 820 aa18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Atxn2lQ7TQH0 1049 aaKnown RBP18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Cetn4Q8K4K1 168 aa18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 LratQ9JI60 231 aa18.17■□□□□ 0.5
Ercc1-201ENSMUST00000003645 AppP12023 770 aa18.16■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Ets1P27577 440 aa18.16■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Ftl2P49945 183 aa18.16■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Ppp4r2Q0VGB7 417 aa18.16■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Nlrp1aQ2LKU9 1182 aa18.16■□□□□ 0.5
Ercc1-201ENSMUST00000003645 EappQ5BU09 281 aa18.16■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Dis3l2Q8CI75 870 aaKnown RBP18.16■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Plcd4Q8K3R3 807 aa18.16■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Tmc2Q8R4P4 888 aa18.16■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Rtn4Q99P72 1162 aaKnown RBP18.16■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Lrp5Q91VN0 1614 aa18.15■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Ube4aE9Q735 1028 aa18.15■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Ccdc27Q3V036 639 aa18.15■□□□□ 0.5
Ercc1-201ENSMUST00000003645 StrcQ8VIM6 1809 aa18.15■□□□□ 0.5
Ercc1-201ENSMUST00000003645 Sh3tc1G3X9F6 1346 aa18.14■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Bin2D3Z6Q9 489 aa18.14■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Atp8a2P98200 1148 aa18.14■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Ncoa5Q91W39 579 aaKnown RBP18.14■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Chmp3Q9CQ10 224 aa18.14■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Mtfr1lQ9CWE0 289 aa18.14■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Lgr5Q9Z1P4 907 aa18.14■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Myo3bQ1EG27 1305 aa18.13■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Brpf1B2RRD7 1212 aa18.13■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Gm7347D3YYI9 267 aa18.13■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Speer4aF8VPX6 267 aa18.13■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Hoxa7P02830 229 aa18.13■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Mcm2P97310 904 aa18.13■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Edc3Q8K2D3 508 aaKnown RBP18.13■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Dbr1Q923B1 550 aa18.13■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Gpr150Q8BL07 427 aa18.12■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Fam102bQ8BQS4 339 aa18.12■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Slc39a11Q8BWY7 342 aa18.12■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Sde2Q8K1J5 448 aaKnown RBP18.12■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Rbm5Q91YE7 815 aaKnown RBP18.12■□□□□ 0.49
Ercc1-201ENSMUST00000003645 EspnQ9ET47 871 aa18.12■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Plekho1Q9JIY0 408 aa18.12■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Col4a5Q63ZW6 1691 aa18.12■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Col3a1P08121 1464 aa18.11■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Anxa1P10107 346 aaKnown RBP18.11■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Atp6v0a2P15920 856 aa18.11■□□□□ 0.49
Ercc1-201ENSMUST00000003645 NfkbibQ60778 359 aa18.11■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Rrs1Q9CYH6 365 aaKnown RBP18.11■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Fbxo3Q9DC63 480 aa18.11■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Heg1E9Q7X6 1337 aa18.1■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Rps8P62242 208 aaKnown RBP18.1■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Gja5Q01231 358 aa18.1■□□□□ 0.49
Ercc1-201ENSMUST00000003645 Plekhf1Q3TB82 279 aa18.1■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms