RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 COMTD1Q86VU5 262 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 OR4C3Q8NH37 302 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 IP6K3Q96PC2 410 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 ZBTB20Q9HC78 741 aaPredicted RBP16.16■□□□□ 0.18
SREK1-216ENST00000612404 PCDHGA10Q9Y5H3 936 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 NPFFR2Q9Y5X5 522 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 PCSK5Q92824 1860 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 HS6ST1O60243 411 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 DIRAS1O95057 198 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 UTS2O95399 124 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 CST1P01037 141 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 NID1P14543 1247 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 HPGDP15428 266 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 ATP12AP54707 1039 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 Q0VFX4 171 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 SRSF6Q13247 344 aaKnown RBP16.16■□□□□ 0.18
SREK1-216ENST00000612404 AP1ARQ63HQ0 302 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 FCRLBQ6BAA4 426 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 DESI1Q6ICB0 168 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 DHRS4L2Q6PKH6 230 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 CLIP4Q8N3C7 705 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 FAM122AQ96E09 287 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 C7orf34Q96L11 122 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 AGPAT4Q9NRZ5 378 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 KLHL28Q9NXS3 571 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 FLRT3Q9NZU0 649 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 RIMS3Q9UJD0 308 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 ABCG2Q9UNQ0 655 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 SLC9A8Q9Y2E8 581 aa16.16■□□□□ 0.18
SREK1-216ENST00000612404 PRAMEF25A6NGN4 478 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 M0R3H8 397 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 TSPAN2O60636 221 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 ZNF354AO60765 605 aaPredicted RBP16.15■□□□□ 0.18
SREK1-216ENST00000612404 ABCB7O75027 752 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 EPPINO95925 133 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 LGI1O95970 557 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 LDLRP01130 860 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 IFNW1P05000 195 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 MAGEA2P43356 314 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 KCNC4Q03721 635 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 CLN3Q13286 438 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 GRAMD1BQ3KR37 738 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 HMBOX1Q6NT76 420 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 CARM1Q86X55 608 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 OR5M3Q8NGP4 307 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 SLC22A8Q8TCC7 542 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 HOXD1Q9GZZ0 328 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 UBQLN4Q9NRR5 601 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 FRYQ5TBA9 3013 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 GNGT2O14610 69 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 ICOSLGO75144 302 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 CYP4B1P13584 511 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 YAP1P46937 504 aaKnown RBP16.15■□□□□ 0.18
SREK1-216ENST00000612404 EEF1A1P68104 462 aaKnown RBP16.15■□□□□ 0.18
SREK1-216ENST00000612404 ZNF141Q15928 474 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 EIPR1Q53HC9 387 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 MRPL2Q5T653 305 aaKnown RBP16.15■□□□□ 0.18
SREK1-216ENST00000612404 ATP1A1-AS1Q5TC04 95 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 KBTBD2Q8IY47 623 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 ZNF527Q8NB42 609 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 WFDC6Q9BQY6 131 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 AMBRA1Q9C0C7 1298 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 RASSF4Q9H2L5 321 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 ARMC7Q9H6L4 198 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 STOML1Q9UBI4 398 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 WASF3Q9UPY6 502 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 CHST2Q9Y4C5 530 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 ZFHX4Q86UP3 3567 aa16.15■□□□□ 0.18
SREK1-216ENST00000612404 NPIPB9F8W1W9 429 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 SYT5O00445 386 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 SCDO00767 359 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 CLOCKO15516 846 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 FRS3O43559 492 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 UGT2B11O75310 529 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 DEAF1O75398 565 aaPredicted RBP16.14■□□□□ 0.17
SREK1-216ENST00000612404 ITGA10O75578 1167 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 PPM1BO75688 479 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 NADKO95544 446 aaPredicted RBP16.14■□□□□ 0.17
SREK1-216ENST00000612404 SERPINA7P05543 415 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 PRKAR1AP10644 381 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 ITGA2P17301 1181 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 PNLIPRP2P54317 469 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 TRIP10Q15642 601 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 ATP6AP1Q15904 470 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 DCAF10Q5QP82 559 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 DEF8Q6ZN54 512 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 RBM45Q8IUH3 476 aaKnown RBP16.14■□□□□ 0.17
SREK1-216ENST00000612404 LACC1Q8IV20 430 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 TMEM102Q8N9M5 508 aaPredicted RBP16.14■□□□□ 0.17
SREK1-216ENST00000612404 OR4D11Q8NGI4 311 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 APOBEC4Q8WW27 367 aaKnown RBP16.14■□□□□ 0.17
SREK1-216ENST00000612404 RASL10BQ96S79 203 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 CDCP1Q9H5V8 836 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 NDUFAF4Q9P032 175 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 CFAP47Q6ZTR5 3102 aa16.14■□□□□ 0.17
SREK1-216ENST00000612404 OR6C70A6NIJ9 312 aa16.13■□□□□ 0.17
SREK1-216ENST00000612404 OXSR1O95747 527 aaPredicted RBP16.13■□□□□ 0.17
SREK1-216ENST00000612404 FBXW4P57775 412 aa16.13■□□□□ 0.17
SREK1-216ENST00000612404 RNF220Q5VTB9 566 aa16.13■□□□□ 0.17
SREK1-216ENST00000612404 PIWIL3Q7Z3Z3 882 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms