RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 KDM4EB2RXH2 506 aaPredicted RBP17.41■□□□□ 0.38
CTSA-217ENST00000607482 LINC01387J3KSC0 135 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 SYT5O00445 386 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 SCDO00767 359 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 ZIC3O60481 467 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 NKX2-2O95096 273 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 KRT16P08779 473 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 SOAT1P35610 550 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 FRKP42685 505 aaPredicted RBP17.41■□□□□ 0.38
CTSA-217ENST00000607482 CCT3P49368 545 aaKnown RBP17.41■□□□□ 0.38
CTSA-217ENST00000607482 RPL14P50914 215 aaKnown RBP17.41■□□□□ 0.38
CTSA-217ENST00000607482 GFRA1P56159 465 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 STX3Q13277 289 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 MLC1Q15049 377 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 MFSD12Q6NUT3 480 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 BHLHB9Q6PI77 547 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 ZZZ3Q8IYH5 903 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 KRTCAP2Q8N6L1 136 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 ANKRD42Q8N9B4 389 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 SLC16A11Q8NCK7 471 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 OR56A1Q8NGH5 318 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 MBD3L2Q8NHZ7 208 aaPredicted RBP17.41■□□□□ 0.38
CTSA-217ENST00000607482 SMPDL3BQ92485 455 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 RNASE6Q93091 150 aaKnown RBP17.41■□□□□ 0.38
CTSA-217ENST00000607482 WNT2BQ93097 391 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 INTS12Q96CB8 462 aaKnown RBP17.41■□□□□ 0.38
CTSA-217ENST00000607482 OTUB1Q96FW1 271 aaPredicted RBP17.41■□□□□ 0.38
CTSA-217ENST00000607482 C16orf58Q96GQ5 468 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 ZFP3Q96NJ6 502 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 TREX2Q9BQ50 279 aaPredicted RBP17.41■□□□□ 0.38
CTSA-217ENST00000607482 PCDHGB4Q9UN71 923 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 RAP2CQ9Y3L5 183 aa17.41■□□□□ 0.38
CTSA-217ENST00000607482 H3BML4 177 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 SEC14L5O43304 696 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 ITM2AO43736 263 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 HMGN2P05204 90 aaKnown RBP17.4■□□□□ 0.38
CTSA-217ENST00000607482 ACP2P11117 423 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 G6PDP11413 515 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 ARRB2P32121 409 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 LHX2P50458 406 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 ZNF136P52737 540 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 EEF1A1P68104 462 aaKnown RBP17.4■□□□□ 0.38
CTSA-217ENST00000607482 POU6F2P78424 691 aaPredicted RBP17.4■□□□□ 0.38
CTSA-217ENST00000607482 EMX2Q04743 252 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 SNTB1Q13884 538 aaKnown RBP17.4■□□□□ 0.38
CTSA-217ENST00000607482 LASP1Q14847 261 aaKnown RBP17.4■□□□□ 0.38
CTSA-217ENST00000607482 BCL2A1Q16548 175 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 DUSP5Q16690 384 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 EEF1A1P5Q5VTE0 462 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 PPP4R4Q6NUP7 873 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 ZNF781Q8N8C0 355 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 FADS6Q8N9I5 356 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 C9orf106Q8NAJ2 232 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 ACBD4Q8NC06 268 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 ADAMTS15Q8TE58 950 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 MOAP1Q96BY2 351 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 FAM120BQ96EK7 910 aaKnown RBP17.4■□□□□ 0.38
CTSA-217ENST00000607482 DUSP26Q9BV47 211 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 BTBD2Q9BX70 525 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 BHLHE41Q9C0J9 482 aaPredicted RBP17.4■□□□□ 0.38
CTSA-217ENST00000607482 UBQLN4Q9NRR5 601 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 NTMQ9P121 344 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.4■□□□□ 0.38
CTSA-217ENST00000607482 ACTL7BQ9Y614 415 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 DCHS2Q6V1P9 2916 aa17.4■□□□□ 0.38
CTSA-217ENST00000607482 C17orf51A8MQB3 221 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 SOX30O94993 753 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 KCNK2O95069 426 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 C6orf47O95873 294 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 IL18BPO95998 194 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 ZNF708P17019 499 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 BGNP21810 368 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 ZNF41P51814 821 aaPredicted RBP17.39■□□□□ 0.37
CTSA-217ENST00000607482 RPS3AP61247 264 aaKnown RBP17.39■□□□□ 0.37
CTSA-217ENST00000607482 SGCBQ16585 318 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 CDH24Q86UP0 819 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 GATSQ8NAP1 163 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 ZNF527Q8NB42 609 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 RELL2Q8NC24 303 aaPredicted RBP17.39■□□□□ 0.37
CTSA-217ENST00000607482 OR5M1Q8NGP8 315 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 RNF138Q8WVD3 245 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 C1GALT1C1Q96EU7 318 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 PGM2Q96G03 612 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 SFXN3Q9BWM7 321 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 ACTRT3Q9BYD9 372 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 NEUROD4Q9HD90 331 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 L3MBTL1Q9Y468 752 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 ARHGAP21Q5T5U3 1957 aa17.39■□□□□ 0.37
CTSA-217ENST00000607482 HCFC1P51610 2035 aa17.38■□□□□ 0.37
CTSA-217ENST00000607482 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.38■□□□□ 0.37
CTSA-217ENST00000607482 TUBAL3A6NHL2 446 aa17.38■□□□□ 0.37
CTSA-217ENST00000607482 SLC22A20A6NK97 555 aa17.38■□□□□ 0.37
CTSA-217ENST00000607482 H3BNH8 94 aa17.38■□□□□ 0.37
CTSA-217ENST00000607482 RCBTB2O95199 551 aa17.38■□□□□ 0.37
CTSA-217ENST00000607482 IGKV1D-16P01601 117 aa17.38■□□□□ 0.37
CTSA-217ENST00000607482 TBXA2RP21731 343 aa17.38■□□□□ 0.37
CTSA-217ENST00000607482 LCN1P31025 176 aa17.38■□□□□ 0.37
CTSA-217ENST00000607482 DIO3P55073 304 aa17.38■□□□□ 0.37
CTSA-217ENST00000607482 DLX5P56178 289 aa17.38■□□□□ 0.37
CTSA-217ENST00000607482 CLDN18P56856 261 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms