RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MEP1AQ16819 746 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 FCRLBQ6BAA4 426 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 TYW3Q6IPR3 259 aaKnown RBP9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 JMJD6Q6NYC1 403 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 NUP54Q7Z3B4 507 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 GPR155Q7Z3F1 870 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 VRK2Q86Y07 508 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ZDHHC21Q8IVQ6 265 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 TMCO5AQ8N6Q1 288 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 SIRT6Q8N6T7 355 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 APCDD1LQ8NCL9 501 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 C17orf47Q8NEP4 570 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 OR52E4Q8NGH9 312 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PHOSPHO1Q8TCT1 267 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ELP5Q8TE02 316 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 GEMIN6Q8WXD5 167 aaKnown RBP9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 DIO2Q92813 273 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 ADIPOR1Q96A54 375 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 TAMM41Q96BW9 452 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 SDCCAG3Q96C92 435 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 CCNL2Q96S94 520 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 CHID1Q9BWS9 393 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 DPH1Q9BZG8 443 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 QRSL1Q9H0R6 528 aaKnown RBP9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 SLC38A1Q9H2H9 487 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 METTL7AQ9H8H3 244 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 SDHAF3Q9NRP4 125 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 UBQLN4Q9NRR5 601 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 OLAHQ9NV23 265 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 STMN3Q9NZ72 180 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 SELENONQ9NZV5 590 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 MYOTQ9UBF9 498 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 PPIEQ9UNP9 301 aaKnown RBP9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 POLHQ9Y253 713 aa9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 GPC6Q9Y625 555 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF1A-211ENST00000538363 hCG_2039718K7EN88 272 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 AP3D1O14617 1153 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TO15178 435 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 NKX2-8O15522 239 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 E2F6O75461 281 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ITGA10O75578 1167 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TIPRLO75663 272 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PPM1BO75688 479 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MFN2O95140 757 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ATP6V1G2O95670 118 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 NUDT14O95848 222 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CST1P01037 141 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 LDLRP01130 860 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FESP07332 822 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 C8BP07358 591 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CELA2AP08217 269 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ITGAMP11215 1152 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 UQCRBP14927 111 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 NAGAP17050 411 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ABCD3P28288 659 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SOX18P35713 384 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RNF144AP50876 292 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CCR4P51679 360 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RGS8P57771 180 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CLN3Q13286 438 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SNCBQ16143 134 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZSWIM7Q19AV6 140 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 DEFB109BQ30KR1 87 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 DCAF10Q5QP82 559 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PDZK1Q5T2W1 519 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 IL20RBQ6UXL0 311 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 DEF8Q6ZN54 512 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CCDC81Q6ZN84 652 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FRRS1Q6ZNA5 592 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 C16orf47Q6ZP98 133 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 VTCN1Q7Z7D3 282 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RANBP3LQ86VV4 465 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TMEM102Q8N9M5 508 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SNIP1Q8TAD8 396 aaKnown RBP9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 BRIX1Q8TDN6 353 aaKnown RBP9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 BDH2Q9BUT1 245 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF350Q9GZX5 532 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 LHPPQ9H008 270 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MAGIXQ9H6Y5 334 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CCM2LQ9NUG4 571 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FBXO34Q9NWN3 711 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 HPF1Q9NWY4 346 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 KLRF1Q9NZS2 232 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RPS6KB2Q9UBS0 482 aa9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF443Q9Y2A4 671 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SPEGQ15772 3267 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TCRBV5S2A0A599 114 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PRAMEF27A3QJZ7 478 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 OR6C70A6NIJ9 312 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 AGAP5A6NIR3 686 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FAM47E-STBD1D6RA91 191 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MASP2O00187 686 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TERTO14746 1132 aaKnown RBP9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 NDUFB5O43674 189 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SCO2O43819 266 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 KIAA0513O60268 411 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 DEAF1O75398 565 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CSTAP01040 98 aa9.82□□□□□ -0.84
TNFRSF1A-211ENST00000538363 MT-ND1P03886 318 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms