RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 PEX12O00623 359 aa22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 HS6ST1O60243 411 aa22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 COX6A1P12074 109 aa22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 RRM2P31350 389 aa22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 SPIBQ01892 262 aa22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 PLCXD2Q0VAA5 305 aa22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 DEF8Q6ZN54 512 aa22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 NDUFAF7Q7L592 441 aa22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 TSEN54Q7Z6J9 526 aaKnown RBP22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 M1APQ8TC57 530 aa22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 RSPO3Q9BXY4 272 aaPredicted RBP22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 POLR2J2Q9GZM3 115 aaKnown RBP22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 POLR2J3Q9H1A7 115 aaKnown RBP22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 UBQLN4Q9NRR5 601 aa22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 ZNF223Q9UK11 482 aaPredicted RBP22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 LRRC42Q9Y546 428 aa22.67■■□□□ 1.22
ECHDC3-201ENST00000379215 M0R3H8 397 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 GFRA3O60609 400 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 DIRAS1O95057 198 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 EPPINO95925 133 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 HPRP00739 348 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 DLSTP36957 453 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 RGS8P57771 180 aaPredicted RBP22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 MAPK14Q16539 360 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 PLAG1Q6DJT9 500 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 TCTN3Q6NUS6 607 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 HMGN2P46Q86SG4 172 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 ZAR1Q86SH2 424 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 ZNF605Q86T29 641 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 RBM4BQ9BQ04 359 aaKnown RBP22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 RBM4Q9BWF3 364 aaKnown RBP22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 ACAD8Q9UKU7 415 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 C15orf41Q9Y2V0 281 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 ZNF292O60281 2723 aa22.66■■□□□ 1.22
ECHDC3-201ENST00000379215 ZFHX2Q9C0A1 2572 aaPredicted RBP22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 NSG1A0A0A6YYJ2 146 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 CDHR4A6H8M9 788 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 TNFRSF11BO00300 401 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 ABCB7O75027 752 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 SDHBP21912 280 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 PNLIPRP2P54317 469 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 AQP4P55087 323 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 MRPL2Q5T653 305 aaKnown RBP22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 STK32CQ86UX6 486 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 RANBP3LQ86VV4 465 aaPredicted RBP22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 GRAMD2AQ8IUY3 354 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 KBTBD2Q8IY47 623 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 GALNT4Q8N4A0 578 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 OR6T1Q8NGN1 323 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 PRRC1Q96M27 445 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 GABARAPL1Q9H0R8 117 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 MMP25Q9NPA2 562 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 KCNE5Q9UJ90 142 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 TESMINQ9Y4I5 508 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 SPEGQ15772 3267 aa22.65■■□□□ 1.22
ECHDC3-201ENST00000379215 CDRT15L2A8MXV6 281 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 PDLIM1O00151 329 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 SOCS2O14508 198 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 SOCS6O14544 535 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 AP3D1O14617 1153 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 ICAM2P13598 275 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 HPGDP15428 266 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 ALDH3A2P51648 485 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 DAG1Q14118 895 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 FGFBP1Q14512 234 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 BTBD16Q32M84 506 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 COLEC12Q5KU26 742 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 PDZK1Q5T2W1 519 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 KIRREL2Q6UWL6 708 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 PIK3C3Q8NEB9 887 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 OR11G2Q8NGC1 345 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 ELP5Q8TE02 316 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 PHF10Q8WUB8 498 aaKnown RBP22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 EFHD2Q96C19 240 aaPredicted RBP22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 IMMP1LQ96LU5 166 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 ZNF597Q96LX8 424 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 DEFB126Q9BYW3 111 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 USE1Q9NZ43 259 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 SLC35A3Q9Y2D2 325 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 CHST2Q9Y4C5 530 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 PCDHGA6Q9Y5G7 932 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 LYVE1Q9Y5Y7 322 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 U3KQV3 271 aa22.64■■□□□ 1.22
ECHDC3-201ENST00000379215 NPIPA5A0A0B4J1W7 369 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 NPIPA7E9PJI5 369 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 SCDO00767 359 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 EI24O14681 340 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 FMO6PO60774 539 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 REM1O75628 298 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 SLC34A2O95436 690 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 NGFRP08138 427 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 NPIPA8P0DM63 369 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 NAGAP17050 411 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 ENDOUP21128 410 aaKnown RBP22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 ABCD3P28288 659 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 HMGA2P52926 109 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 CDH12P55289 794 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 COMTD1Q86VU5 262 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 RAB43Q86YS6 212 aa22.64■■□□□ 1.21
ECHDC3-201ENST00000379215 LACC1Q8IV20 430 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms