RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Znf354bQ9QXT9 601 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Padi1Q9Z185 662 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Tarbp1E9Q368 1579 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 CatsperbA2RTF1 1109 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Rpp30O88796 268 aaKnown RBP17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Siah1aP61092 282 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Rab33aP97950 237 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Siah1bQ06985 282 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 ptchd1Q14B62 888 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Mettl4Q3U034 471 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Arhgef39Q66JY6 344 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Kcmf1Q80UY2 381 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Pla1aQ8VI78 456 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Gm8369E9PZI3 166 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Gpr160Q3U3F9 336 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Klra4Q60651 263 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Ntan1Q64311 310 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Rph3alQ768S4 302 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Vmn1r185Q8R299 319 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Zswim2Q9D9X6 631 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Cyp11a1Q9QZ82 526 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Ssxa1B1AUS7 101 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 GifP52787 417 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Uap1l1Q3TW96 507 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Gramd2aQ3V3G7 320 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Slc41a2Q8BYR8 573 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 MfrpQ8K480 584 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Jam2Q9JI59 298 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 PrebQ9WUQ2 417 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Ckap5A2AGT5 2032 aaKnown RBP17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Olfr1291-ps1A0A286YE47 326 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Cxcl5P50228 132 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 ArvcfP98203 962 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Gtf2a2Q80ZM7 109 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Nudt7Q99P30 236 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Mien1Q9CQ86 115 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Ndufa6Q9CQZ5 131 aaKnown RBP17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Hint2Q9D0S9 163 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Brix1Q9DCA5 353 aaKnown RBP17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Sema7aQ9QUR8 664 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Abca6Q8K441 1624 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 4930402F06RikA2AUQ8 332 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Olfr1360K9J6X0 313 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 NfyaP23708 346 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Slc35f3Q1LZI2 421 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Znf235Q61116 645 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Olfr1359Q7TQU5 313 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Olfr524Q7TRU0 318 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Q8C3W1 322 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 CdnfQ8CC36 187 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Hoxc12Q8K5B8 280 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Gm5114W4VSN8 858 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Zfp616J3QN14 987 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Q24JP4 165 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Slc35g3Q5F297 340 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Galk2Q68FH4 458 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 SowahcQ8C0J6 512 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Elac1Q8VEB6 362 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Slc27a4Q91VE0 643 aaKnown RBP17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Rnf141Q99MB7 230 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Chac2Q9CQG1 178 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Elovl2Q9JLJ4 292 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 NagaQ9QWR8 415 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Q9CPZ3 230 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 F9P16294 471 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Hnf1bP27889 558 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Lsm5P62322 91 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Kcnj8P97794 424 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Sgip1Q8VD37 806 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Klrg1O88713 188 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 S100a10P08207 97 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Washc3Q9CR27 194 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Rrp8Q9DB85 457 aaKnown RBP17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Ndst3Q9EQH7 873 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Rcan2Q9JHG2 197 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Usp18Q9WTV6 368 aa17.56■□□□□ 0.4
Trim71-201ENSMUST00000111816 Btbd35f16A0A087WSN2 498 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Aldoart1A6ZI46 419 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Cd3gP11942 182 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Tacr2P30549 384 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Rps5P97461 204 aaKnown RBP17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Q0VG62 139 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Il17reQ8BH06 637 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Zcchc14Q8VIG0 956 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Rab3bQ9CZT8 219 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Dido1Q8C9B9 2256 aaKnown RBP17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Gm28710A0A1B0GR31 962 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Srsf5O35326 269 aaKnown RBP17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Klf10O89091 479 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Mtnd5P03921 607 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Olfr381Q5SSP0 311 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Foxd3Q61060 465 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Syt15Q8C6N3 418 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 AA792892Q8C6S1 278 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Vmn1r200Q8R281 312 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Asb8Q91ZT9 288 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Cd209cQ91ZW9 178 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Syt13Q9EQT6 426 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Zfp141G3UY09 685 aa17.55■□□□□ 0.4
Trim71-201ENSMUST00000111816 Gjd2O54851 321 aa17.55■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms