RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 MPDZO75970 2070 aa8.42□□□□□ -1.06
LINCMD1-201ENST00000418518 ASCC3Q8N3C0 2202 aaKnown RBP8.42□□□□□ -1.06
LINCMD1-201ENST00000418518 PRUNE2Q8WUY3 3088 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 TECTAO75443 2155 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 CENPVL1A0A0U1RR11 272 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 A0A1B0GVT2 93 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 CDHR4A6H8M9 788 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 EFCAB10A6NFE3 127 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 NPIPB9F8W1W9 429 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 CLDN4O14493 209 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 AP3D1O14617 1153 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 FRS3O43559 492 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 OR10H2O60403 315 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 PRAMEF2O60811 474 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 NOL3O60936 208 aaKnown RBP8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 SDC3O75056 442 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 KCNK2O95069 426 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 THY1P04216 161 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 CCNYL3P0C7X3 344 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 POU2F1P14859 743 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 PNLIPP16233 465 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 CCNA2P20248 432 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 FPR3P25089 353 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 EPHA8P29322 1005 aaPredicted RBP8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 ALDH4A1P30038 563 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 IFNA8P32881 189 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 CSF2RBP32927 897 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 OMPP47874 163 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 HSD11B2P80365 405 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 EFNB1P98172 346 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 PSG6Q00889 435 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 NFATC3Q12968 1075 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 TARDBPQ13148 414 aaKnown RBP eCLIP8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 SERTAD2Q14140 314 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 MAPK14Q16539 360 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 OCLNQ16625 522 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 MRPL2Q5T653 305 aaKnown RBP8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 YOD1Q5VVQ6 348 aaPredicted RBP8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 PEAR1Q5VY43 1037 aaPredicted RBP8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 MEDAGQ5VYS4 303 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 RNLSQ5VYX0 342 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 PMS2CLQ68D20 193 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 WDR74Q6RFH5 385 aaPredicted RBP8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 RASSF6Q6ZTQ3 369 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 PLEKHM3Q6ZWE6 761 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 GDF7Q7Z4P5 450 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 HMGN2P46Q86SG4 172 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 PLXDC1Q8IUK5 500 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 NLGN4XQ8N0W4 816 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 CLDN22Q8N7P3 220 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 C7orf57Q8NEG2 295 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 OR52R1Q8NGF1 315 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 OR8J1Q8NGP2 316 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 WDR36Q8NI36 951 aaKnown RBP8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 PIGXQ8TBF5 258 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 PEX11GQ96HA9 241 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 OR1F2PQ96R84 312 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 ELF4Q99607 663 aaPredicted RBP8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 MCHR1Q99705 422 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 GPA33Q99795 319 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 COPS4Q9BT78 406 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 FUNDC2Q9BWH2 189 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 CDCA4Q9BXL8 241 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 LANCL2Q9NS86 450 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 C14orf105Q9NVL8 296 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 SOHLH2Q9NX45 425 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 NLGN3Q9NZ94 848 aa8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 TESQ9UGI8 421 aaKnown RBP8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 TMEM184BQ9Y519 407 aaPredicted RBP8.41□□□□□ -1.06
LINCMD1-201ENST00000418518 IGKV3D-11A0A0A0MRZ8 115 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 GXYLT2A0PJZ3 443 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 TRAPPC13A5PLN9 417 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 CLDN24A6NM45 220 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 TOX3O15405 576 aaPredicted RBP8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 HYAL3O43820 417 aaPredicted RBP8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 SOX14O95416 240 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 FADS2O95864 444 aaKnown RBP8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 CLPSP04118 112 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 CD1CP29017 333 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 TGFBR2P37173 567 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 STAT5AP42229 794 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 MAP2K4P45985 399 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 ST13P50502 369 aaKnown RBP8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 PSMD4P55036 377 aaKnown RBP8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 OR1D5P58170 312 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 STX4Q12846 297 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 BNIP3Q12983 259 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 SLC13A2Q13183 592 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 ZNHIT3Q15649 155 aaPredicted RBP8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 ZNF141Q15928 474 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 CTF1Q16619 201 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 CCNJQ5T5M9 372 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 MFSD4BQ5TF39 518 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 TMEM236Q5W0B7 351 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 LYSMD4Q5XG99 296 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 NPSR1Q6W5P4 371 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 QSOX2Q6ZRP7 698 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 PTCHD4Q6ZW05 846 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 MBOAT2Q6ZWT7 520 aa8.4□□□□□ -1.06
LINCMD1-201ENST00000418518 RANBP3LQ86VV4 465 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms