RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 CT45A8P0DMV1 189 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 CT45A9P0DMV2 189 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 NAGAP17050 411 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 ENDOUP21128 410 aaKnown RBP11.54□□□□□ -0.56
TSEN54-204ENST00000577197 MMP11P24347 488 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 SSTR4P31391 388 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 HSPA13P48723 471 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 EFNA3P52797 238 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 LARS2Q15031 903 aaKnown RBP11.54□□□□□ -0.56
TSEN54-204ENST00000577197 EBPQ15125 230 aaKnown RBP11.54□□□□□ -0.56
TSEN54-204ENST00000577197 EXT1Q16394 746 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 IQCCQ4KMZ1 466 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 LIN52Q52LA3 116 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 GPAT3Q53EU6 434 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 SFT2D3Q587I9 215 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 CT45A2Q5DJT8 189 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 TYW3Q6IPR3 259 aaKnown RBP11.54□□□□□ -0.56
TSEN54-204ENST00000577197 SLC29A4Q7RTT9 530 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 ZDHHC21Q8IVQ6 265 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 ZNF441Q8N8Z8 693 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 OR5L2Q8NGL0 311 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 LRTOMTQ8WZ04 291 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 CDS1Q92903 461 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 ADIPOR1Q96A54 375 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 LCORQ96JN0 433 aaPredicted RBP11.54□□□□□ -0.56
TSEN54-204ENST00000577197 COL21A1Q96P44 957 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 IP6K3Q96PC2 410 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 SEPHS2Q99611 448 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 PKP2Q99959 881 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 C9orf16Q9BUW7 83 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 ZNF700Q9H0M5 742 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 KLHL28Q9NXS3 571 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 ZNF232Q9UNY5 417 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 PCDHGA6Q9Y5G7 932 aa11.54□□□□□ -0.56
TSEN54-204ENST00000577197 NPIPB9F8W1W9 429 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 STMND1H3BQB6 276 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 TIPRLO75663 272 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 DNAJB5O75953 348 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 LGI1O95970 557 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 CST1P01037 141 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 IFNW1P05000 195 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 FESP07332 822 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 NID1P14543 1247 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 RHCEP18577 417 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 SPINK2P20155 84 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 ATP6V1C1P21283 382 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 GABRA3P34903 492 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 PTGER1P34995 402 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 ADH7P40394 386 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 FOLR3P41439 243 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 PGDP52209 483 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 CASP9P55211 416 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 TRIP10Q15642 601 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 ZNF141Q15928 474 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 DECR1Q16698 335 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 CMPK2Q5EBM0 449 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 OR2T5Q6IEZ7 315 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 PPP4R4Q6NUP7 873 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 GRAMD2AQ8IUY3 354 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 NLGN4XQ8N0W4 816 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 ARMC10Q8N2F6 343 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 FAM86B1Q8N7N1 296 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 GALNT6Q8NCL4 622 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 APCDD1LQ8NCL9 501 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 TOR1AIP2Q8NFQ8 470 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 NLGN4YQ8NFZ3 816 aaPredicted RBP11.53□□□□□ -0.56
TSEN54-204ENST00000577197 OR2T29Q8NH02 315 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 RDH12Q96NR8 316 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 WDR77Q9BQA1 342 aaPredicted RBP11.53□□□□□ -0.56
TSEN54-204ENST00000577197 YIPF4Q9BSR8 244 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 KLHL4Q9C0H6 718 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 OR8D2Q9GZM6 311 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 ANKRA2Q9H9E1 313 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 KCND3Q9UK17 655 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 ACAD8Q9UKU7 415 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 CBLCQ9ULV8 474 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 KCNE3Q9Y6H6 103 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 ENPP4Q9Y6X5 453 aa11.53□□□□□ -0.56
TSEN54-204ENST00000577197 SPTBN4Q9H254 2564 aa11.52□□□□□ -0.56
TSEN54-204ENST00000577197 C2orf92A0A1B0GVN3 265 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 ARRDC5A6NEK1 342 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 CDK2AP1O14519 115 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 TERTO14746 1132 aaKnown RBP11.52□□□□□ -0.57
TSEN54-204ENST00000577197 RAD1O60671 282 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 FMO6PO60774 539 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 ABCB7O75027 752 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 IL33O95760 270 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 HPRP00739 348 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 UMODP07911 640 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 ICAM2P13598 275 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 AQP1P29972 269 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 SOX11P35716 441 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 STAT5AP42229 794 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 ERFP50548 548 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 HMGA2P52926 109 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 SMIM11AP58511 58 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 RPS15P62841 145 aaKnown RBP11.52□□□□□ -0.57
TSEN54-204ENST00000577197 CHRNEQ04844 493 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 SSPNQ14714 243 aa11.52□□□□□ -0.57
TSEN54-204ENST00000577197 NRF1Q16656 503 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms