RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	CAMTA1	Q9Y6Y1	1673 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288		A0A1W2PPQ1	181 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	BTBD17	A6NE02	478 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	SOWAHB	A6NEL2	793 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	TARM1	B6A8C7	271 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	PMS2P2	O95744	297 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	GAST	P01350	101 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	DCN	P07585	359 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	UAP1L1	Q3KQV9	507 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	SPOUT1	Q5T280	376 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	CRTC1	Q6UUV9	634 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	EFCAB11	Q9BUY7	163 aa		4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	POLDIP3	Q9BY77	421 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-231	ENST00000564288	AGRP	O00253	132 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	SOAT1	P35610	550 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	ZMAT1	Q5H9K5	638 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	C1orf220	Q5T0J3	134 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	ARHGAP11A	Q6P4F7	1023 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	BTNL3	Q6UXE8	466 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	TRMT11	Q7Z4G4	463 aa	Known RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	UBAC2	Q8NBM4	344 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	OR9I1	Q8NGQ6	314 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	OR56A3	Q8NH54	315 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	UCK1	Q9HA47	277 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC22A31	A6NKX4	558 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	NPIPA2	E9PIF3	369 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	MEN1	O00255	615 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	OR2C1	O95371	312 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	HTR2C	P28335	458 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	ECI1	P42126	302 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	IFITM3	Q01628	133 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	KCNAB1	Q14722	419 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	FAM26D	Q5JW98	314 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	FBLIM1	Q8WUP2	373 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	HGD	Q93099	445 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	C12orf42	Q96LP6	360 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	EDEM2	Q9BV94	578 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF736	B4DX44	427 aa	Predicted RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	DRD2	P14416	443 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	PCMT1	P22061	227 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	CROCC	Q5TZA2	2017 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	PELI3	Q8N2H9	469 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	NETO2	Q8NC67	525 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	UBQLN3	Q9H347	655 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	FNDC3A	Q9Y2H6	1198 aa	Known RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	TRAV1-2	A0A0B4J238	106 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	CCND3	P30281	292 aa	Predicted RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	HTR1F	P30939	366 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	AQP2	P41181	271 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	MAP3K3	Q99759	626 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	GSN-AS1	Q9NRJ2	163 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	LOC105369274	A0A096LPK9	316 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	GABRR3	A8MPY1	467 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	VNN1	O95497	513 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	HEXB	P07686	556 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	MASP1	P48740	699 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	AQP6	Q13520	282 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	APOBEC3H	Q6NTF7	200 aa	Known RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	BAP18	Q8IXM2	172 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	OR4N4	Q8N0Y3	316 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	FAM98A	Q8NCA5	519 aa	Known RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	RAB7B	Q96AH8	199 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	TOE1	Q96GM8	510 aa	Known RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	GOLT1B	Q9Y3E0	138 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	KIAA0100	Q14667	2235 aa	Known RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	GLA	P06280	429 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	CAP2	P40123	477 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF280B	Q86YH2	543 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	SMPDL3A	Q92484	453 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	C14orf79	Q96F83	325 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	SENP8	Q96LD8	212 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	GPR78	Q96P69	363 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	NTMT1	Q9BV86	223 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	OR2T4	Q8NH00	348 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	PXYLP1	Q8TE99	480 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	TSSK3	Q96PN8	268 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	MUC3B	Q9H195	1237 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	MVB12B	Q9H7P6	319 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	QTRT2	Q9H974	415 aa	Known RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	FAM230A	A0A1W2PPH8	454 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	GLTPD2	A6NH11	291 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	PTP4A3	O75365	173 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	USP17L7	P0C7H9	530 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	PSMB6	P28072	239 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	BCL2L1	Q07817	233 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	GLRX5	Q86SX6	157 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	VRK3	Q8IV63	474 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	PRRT1	Q99946	306 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	GPATCH2	Q9NW75	528 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	PCDHGA6	Q9Y5G7	932 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288		A0A1B0GUH1	482 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	NDUFA2	O43678	99 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	SIX3	O95343	332 aa	Predicted RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	C1QTNF8	P60827	252 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	ARF3	P61204	181 aa	Predicted RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	ARF1	P84077	181 aa	Known RBP	4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	MICB	Q29980	383 aa		4.03	□□□□□ -1.76
MACF1-231	ENST00000564288	RTP2	Q5QGT7	225 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms