RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 DEPDC4Q8N2C3 294 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 ZNF619Q8N2I2 560 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 MORN4Q8NDC4 146 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 OR13F1Q8NGS4 319 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 NR4A3Q92570 626 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 C12orf43Q96C57 262 aaKnown RBP14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 RBM18Q96H35 190 aaKnown RBP14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 FBXO34Q9NWN3 711 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 ZNF226Q9NYT6 803 aa14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 MN1Q10571 1320 aaPredicted RBP14.38□□□□□ -0.11
THUMPD3-210ENST00000515662 CENPVL1A0A0U1RR11 272 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 GXYLT2A0PJZ3 443 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 OR2W5A6NFC9 320 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 CLDN24A6NM45 220 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 TMEM150CB9EJG8 249 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 FAM20BO75063 409 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 NKX2-2O95096 273 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 AK1P00568 194 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 RPS4Y1P22090 263 aaKnown RBP14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 TAS2R41P59536 307 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 EEF1A1P68104 462 aaKnown RBP14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 LARS2Q15031 903 aaKnown RBP14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 SNAP47Q5SQN1 464 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 GTF2IRD2BQ6EKJ0 949 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 KANSL1Q7Z3B3 1105 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 GTF2IRD2Q86UP8 949 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 LINC00471Q8N535 108 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 OR4K5Q8NGD3 323 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 RHNO1Q9BSD3 238 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 TIMMDC1Q9NPL8 285 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 CUTCQ9NTM9 273 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 PILRBQ9UKJ0 227 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 COL6A3P12111 3177 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 CACNA1IQ9P0X4 2223 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 HRKO00198 91 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 ZNF749O43361 778 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 SEC14L2O76054 403 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 ATE1O95260 518 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 CCNYL3P0C7X3 344 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 GABRB1P18505 474 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 MAOAP21397 527 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 PCMT1P22061 227 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 EPHA8P29322 1005 aaPredicted RBP14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 TRHRP34981 398 aaPredicted RBP14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 ENTPD1P49961 510 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 HSD17B7P56937 341 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 RGS8P57771 180 aaPredicted RBP14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 CSNK2BP67870 215 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 TARDBPQ13148 414 aaKnown RBP eCLIP14.37□□□□□ -0.111e-10■■■■■ 37.7
THUMPD3-210ENST00000515662 DCTN2Q13561 401 aaKnown RBP14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 MAPK14Q16539 360 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 TMEM236Q5W0B7 351 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 WDR74Q6RFH5 385 aaPredicted RBP14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 CCDC103Q8IW40 242 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 ALDH16A1Q8IZ83 802 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 D2HGDHQ8N465 521 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 DIO2Q92813 273 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 CNDP2Q96KP4 475 aaKnown RBP14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 DGAT2Q96PD7 388 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 CCDC90BQ9GZT6 254 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 NLGN3Q9NZ94 848 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 PCDHGB1Q9Y5G3 927 aa14.37□□□□□ -0.11
THUMPD3-210ENST00000515662 CPSF4LA6NMK7 179 aaKnown RBP14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 ZNF701M0R085 212 aaPredicted RBP14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 KIAA0513O60268 411 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 CYP7B1O75881 506 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 DBIP07108 87 aaKnown RBP14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 POU1F1P28069 291 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 EMDP50402 254 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 POU6F2P78424 691 aaPredicted RBP14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 HOXC5Q00444 222 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 ILKQ13418 452 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 TMED1Q13445 227 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 GPR107Q5VW38 600 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 FIGNL1Q6PIW4 674 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 PRSS42Q7Z5A4 293 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 ZER1Q7Z7L7 766 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 GATAD2AQ86YP4 633 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 ZNF540Q8NDQ6 660 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 ABTB1Q969K4 478 aaPredicted RBP14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 CCDC74AQ96AQ1 378 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 SLC41A2Q96JW4 573 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 LMF2Q9BU23 707 aaKnown RBP14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 LHPPQ9H008 270 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 POLR2J3Q9H1A7 115 aaKnown RBP14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 SEMA4GQ9NTN9 838 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 IMPAD1Q9NX62 359 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 KCNE5Q9UJ90 142 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 MAU2Q9Y6X3 613 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 SOX30O94993 753 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 ITIH1P19827 911 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 MMP11P24347 488 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 DCKP27707 260 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 SSTR4P31391 388 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 LSM11P83369 360 aaKnown RBP eCLIP14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 TEKQ02763 1124 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 TUBA3CQ13748 450 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 TRAM2Q15035 370 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 ANKDD1AQ495B1 522 aa14.36□□□□□ -0.11
THUMPD3-210ENST00000515662 EIPR1Q53HC9 387 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms