RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 GLRA3O75311 464 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 ATP6V1G1O75348 118 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 ZNF217O75362 1048 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 CSO75390 466 aaKnown RBP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 VPS26AO75436 327 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 ECI2O75521 394 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 PDE9AO76083 593 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 CSN3P07498 182 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 KRT19P08727 400 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 SNRPAP09012 282 aaKnown RBP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 OR2T7P0C7T2 308 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 STAG3L1P0CL83 205 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 CETPP11597 493 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 RPA2P15927 270 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 CYP3A5P20815 502 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 MARK3P27448 753 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 MIPP30301 263 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 RPL22P35268 128 aaKnown RBP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 FDFT1P37268 417 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 CAPGP40121 348 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 CDX1P47902 265 aaPredicted RBP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 RPL34P49207 117 aaKnown RBP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 CXCR3P49682 368 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 CDH6P55285 790 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 MTCP1P56278 107 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 SSTP61278 116 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 IRX4P78413 519 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 BASP1P80723 227 aaKnown RBP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 OGDHQ02218 1023 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 ZNF33AQ06730 810 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 ARL16Q0P5N6 197 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 PRKAA1Q13131 559 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 DPYSL3Q14195 570 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 KCNJ11Q14654 390 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 TRIP13Q15645 432 aaPredicted RBP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 STK11Q15831 433 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 MEP1AQ16819 746 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 FBXO48Q5FWF7 155 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 LDLRAP1Q5SW96 308 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 DCST1Q5T197 706 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 SIGIRRQ6IA17 410 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 CLEC2AQ6UVW9 174 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 PRSS55Q6UWB4 352 aaPredicted RBP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 B3GNT6Q6ZMB0 384 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 TIFABQ6ZNK6 161 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 C3orf62Q6ZUJ4 267 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 SLC26A9Q7LBE3 791 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 NLRP9Q7RTR0 991 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 SLC16A9Q7RTY1 509 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 NANOGNBQ7Z5D8 188 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 ECHDC2Q86YB7 292 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 DSELQ8IZU8 1212 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 C1orf87Q8N0U7 546 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 NAGSQ8N159 534 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 ZNF441Q8N8Z8 693 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 SCCPDHQ8NBX0 429 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 FBXO36Q8NEA4 188 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 OR13A1Q8NGR1 328 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 OR52J3Q8NH60 311 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 HM13Q8TCT9 377 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 TANKQ92844 425 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 RHBDF1Q96CC6 855 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 RASD2Q96D21 266 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 C19orf60Q96EN9 201 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 TMEM19Q96HH6 336 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 HPDLQ96IR7 371 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 HSFY1Q96LI6 401 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 PRICKLE1Q96MT3 831 aaPredicted RBP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 AGAP3Q96P47 875 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 RNF157Q96PX1 679 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 RASL10BQ96S79 203 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 VAT1Q99536 393 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 TMEM121Q9BTD3 319 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 CCDC28BQ9BUN5 200 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 TSSK1BQ9BXA7 367 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 EGLN1Q9GZT9 426 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 SIRPDQ9H106 197 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 SDCBP2Q9H190 292 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 VCX3BQ9H321 246 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 DCLRE1BQ9H816 532 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 TBC1D17Q9HA65 648 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 HINT3Q9NQE9 182 aaKnown RBP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 GPR173Q9NS66 373 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 THEGQ9P2T0 379 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 ATXN10Q9UBB4 475 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 BCAP29Q9UHQ4 241 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 SIX4Q9UIU6 781 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 RNF150Q9ULK6 438 aa3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 UBQLN1Q9UMX0 589 aaKnown RBP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 NOSIPQ9Y314 301 aaKnown RBP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.94□□□□□ -1.78
CALCOCO2-208ENST00000506971 PATJQ8NI35 1801 aa3.93□□□□□ -1.78
CALCOCO2-208ENST00000506971 A0A087X0K7 114 aa3.93□□□□□ -1.78
CALCOCO2-208ENST00000506971 SERTM2A0A1B0GWG4 89 aa3.93□□□□□ -1.78
CALCOCO2-208ENST00000506971 TMEM129A0AVI4 362 aa3.93□□□□□ -1.78
CALCOCO2-208ENST00000506971 EIF4E1BA6NMX2 242 aaKnown RBP3.93□□□□□ -1.78
CALCOCO2-208ENST00000506971 H3BMM5 538 aa3.93□□□□□ -1.78
CALCOCO2-208ENST00000506971 GOLGA8SH3BPF8 625 aa3.93□□□□□ -1.78
CALCOCO2-208ENST00000506971 M0QZ24 198 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms