RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 AEBP2Q6ZN18 517 aaPredicted RBP24.07■■□□□ 1.44
CALCOCO2-208ENST00000506971 CHIC1Q5VXU3 224 aa23.22■■□□□ 1.31
CALCOCO2-208ENST00000506971 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
CALCOCO2-208ENST00000506971 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
CALCOCO2-208ENST00000506971 FOXD1Q16676 465 aa19.06■□□□□ 0.64
CALCOCO2-208ENST00000506971 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
CALCOCO2-208ENST00000506971 ADRA2BP18089 450 aa18.17■□□□□ 0.5
CALCOCO2-208ENST00000506971 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
CALCOCO2-208ENST00000506971 PIAS4Q8N2W9 510 aaPredicted RBP18.01■□□□□ 0.47
CALCOCO2-208ENST00000506971 MSH5O43196 834 aa17.7■□□□□ 0.42
CALCOCO2-208ENST00000506971 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
CALCOCO2-208ENST00000506971 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
CALCOCO2-208ENST00000506971 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
CALCOCO2-208ENST00000506971 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
CALCOCO2-208ENST00000506971 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
CALCOCO2-208ENST00000506971 CNKSR2Q8WXI2 1034 aa16.11■□□□□ 0.17
CALCOCO2-208ENST00000506971 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
CALCOCO2-208ENST00000506971 DCAF8L1A6NGE4 600 aa15.91■□□□□ 0.14
CALCOCO2-208ENST00000506971 KCNA4P22459 653 aa15.85■□□□□ 0.13
CALCOCO2-208ENST00000506971 RNF216Q9NWF9 866 aaPredicted RBP15.83■□□□□ 0.12
CALCOCO2-208ENST00000506971 HOXD11P31277 338 aaPredicted RBP15.79■□□□□ 0.12
CALCOCO2-208ENST00000506971 NPM3O75607 178 aaKnown RBP15.77■□□□□ 0.12
CALCOCO2-208ENST00000506971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.28■□□□□ 0.044e-10■■■□□ 18
CALCOCO2-208ENST00000506971 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
CALCOCO2-208ENST00000506971 RNF39Q9H2S5 420 aa15.09■□□□□ 0.01
CALCOCO2-208ENST00000506971 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
CALCOCO2-208ENST00000506971 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
CALCOCO2-208ENST00000506971 SLC4A2P04920 1241 aa14.92□□□□□ -0.02
CALCOCO2-208ENST00000506971 C1QBPQ07021 282 aaKnown RBP14.92□□□□□ -0.02
CALCOCO2-208ENST00000506971 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
CALCOCO2-208ENST00000506971 CAPN15O75808 1086 aa14.65□□□□□ -0.06
CALCOCO2-208ENST00000506971 FOXD4L1Q9NU39 408 aa14.65□□□□□ -0.06
CALCOCO2-208ENST00000506971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.61□□□□□ -0.07
CALCOCO2-208ENST00000506971 HNRNPUL2Q1KMD3 747 aaKnown RBP14.61□□□□□ -0.07
CALCOCO2-208ENST00000506971 SPINK5Q9NQ38 1064 aaPredicted RBP14.59□□□□□ -0.07
CALCOCO2-208ENST00000506971 MYCNP04198 464 aaPredicted RBP14.58□□□□□ -0.08
CALCOCO2-208ENST00000506971 APLP2Q06481 763 aa14.55□□□□□ -0.08
CALCOCO2-208ENST00000506971 SAMD1Q6SPF0 538 aaPredicted RBP14.54□□□□□ -0.08
CALCOCO2-208ENST00000506971 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
CALCOCO2-208ENST00000506971 ZBTB22O15209 634 aa14.52□□□□□ -0.09
CALCOCO2-208ENST00000506971 EHMT2Q96KQ7 1210 aa14.47□□□□□ -0.09
CALCOCO2-208ENST00000506971 ZNF219Q9P2Y4 722 aaPredicted RBP14.37□□□□□ -0.11
CALCOCO2-208ENST00000506971 ABCB7O75027 752 aa14.35□□□□□ -0.11
CALCOCO2-208ENST00000506971 DSG3P32926 999 aa14.3□□□□□ -0.12
CALCOCO2-208ENST00000506971 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
CALCOCO2-208ENST00000506971 ATF5Q9Y2D1 282 aaPredicted RBP14.23□□□□□ -0.13
CALCOCO2-208ENST00000506971 POLA2Q14181 598 aa14.14□□□□□ -0.15
CALCOCO2-208ENST00000506971 ATXN8OSP0DMR3 200 aa14.08□□□□□ -0.16
CALCOCO2-208ENST00000506971 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
CALCOCO2-208ENST00000506971 FBLN2P98095 1184 aa13.74□□□□□ -0.21
CALCOCO2-208ENST00000506971 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
CALCOCO2-208ENST00000506971 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
CALCOCO2-208ENST00000506971 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
CALCOCO2-208ENST00000506971 ZNF692Q9BU19 519 aaPredicted RBP13.43□□□□□ -0.26
CALCOCO2-208ENST00000506971 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
CALCOCO2-208ENST00000506971 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
CALCOCO2-208ENST00000506971 SPDYE2Q495Y8 402 aa13.41□□□□□ -0.26
CALCOCO2-208ENST00000506971 AKT1S1Q96B36 256 aa13.41□□□□□ -0.26
CALCOCO2-208ENST00000506971 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO2-208ENST00000506971 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
CALCOCO2-208ENST00000506971 CHRDL2Q6WN34 429 aa13.23□□□□□ -0.29
CALCOCO2-208ENST00000506971 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
CALCOCO2-208ENST00000506971 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
CALCOCO2-208ENST00000506971 SSUH2Q9Y2M2 353 aa13.2□□□□□ -0.3
CALCOCO2-208ENST00000506971 PITPNM1O00562 1244 aa13.18□□□□□ -0.3
CALCOCO2-208ENST00000506971 POTEHQ6S545 545 aa13.14□□□□□ -0.31
CALCOCO2-208ENST00000506971 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-208ENST00000506971 FKBP8Q14318 412 aa13.01□□□□□ -0.33
CALCOCO2-208ENST00000506971 PRR29P0C7W0 189 aa13□□□□□ -0.33
CALCOCO2-208ENST00000506971 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
CALCOCO2-208ENST00000506971 FXR2P51116 673 aaKnown RBP eCLIP12.91□□□□□ -0.34
CALCOCO2-208ENST00000506971 PRKAR2AP13861 404 aaKnown RBP12.9□□□□□ -0.34
CALCOCO2-208ENST00000506971 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
CALCOCO2-208ENST00000506971 CHADLQ6NUI6 762 aa12.87□□□□□ -0.35
CALCOCO2-208ENST00000506971 HAX1O00165 279 aa12.78□□□□□ -0.36
CALCOCO2-208ENST00000506971 PROM2Q8N271 834 aa12.72□□□□□ -0.37
CALCOCO2-208ENST00000506971 MIER1Q8N108 512 aa12.65□□□□□ -0.38
CALCOCO2-208ENST00000506971 CREBZFQ9NS37 354 aa12.65□□□□□ -0.38
CALCOCO2-208ENST00000506971 FARP1Q9Y4F1 1045 aaPredicted RBP12.64□□□□□ -0.39
CALCOCO2-208ENST00000506971 PLEKHG5O94827 1062 aa12.62□□□□□ -0.39
CALCOCO2-208ENST00000506971 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
CALCOCO2-208ENST00000506971 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
CALCOCO2-208ENST00000506971 NPM1P06748 294 aaKnown RBP eCLIP12.52□□□□□ -0.41
CALCOCO2-208ENST00000506971 EVX2Q03828 476 aa12.52□□□□□ -0.41
CALCOCO2-208ENST00000506971 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
CALCOCO2-208ENST00000506971 C19orf67A6NJJ6 358 aa12.49□□□□□ -0.41
CALCOCO2-208ENST00000506971 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
CALCOCO2-208ENST00000506971 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
CALCOCO2-208ENST00000506971 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
CALCOCO2-208ENST00000506971 KLHL34Q8N239 644 aa12.41□□□□□ -0.42
CALCOCO2-208ENST00000506971 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
CALCOCO2-208ENST00000506971 TSPYL2Q9H2G4 693 aaPredicted RBP12.39□□□□□ -0.43
CALCOCO2-208ENST00000506971 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
CALCOCO2-208ENST00000506971 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
CALCOCO2-208ENST00000506971 GABBR2O75899 941 aa12.28□□□□□ -0.44
CALCOCO2-208ENST00000506971 PHF12Q96QT6 1004 aa12.27□□□□□ -0.45
CALCOCO2-208ENST00000506971 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
CALCOCO2-208ENST00000506971 DCAF8Q5TAQ9 597 aa12.22□□□□□ -0.45
CALCOCO2-208ENST00000506971 ZNF579Q8NAF0 562 aaKnown RBP12.22□□□□□ -0.45
CALCOCO2-208ENST00000506971 FAM212AQ96EL1 285 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms