RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 C4AP0C0L4 1744 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 C4BP0C0L5 1744 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 ABCC4O15439 1325 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 LAMA4Q16363 1823 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 TAF1LQ8IZX4 1826 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 LY75O60449 1722 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 COL24A1Q17RW2 1714 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 IGLV3-10A0A075B6K4 115 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 TRAV9-2A0A087WT02 112 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 A0A0U1RQG5 324 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZSCAN5CA6NGD5 496 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 CCDC69A6NI79 296 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 SLC9B1P1A6NJY1 282 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 BUB1O43683 1085 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 IGHV3-9P01782 118 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 CXCL10P02778 98 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 THY1P04216 161 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 MARCKSP29966 332 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 ARHGDIAP52565 204 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 SLC7A2P52569 658 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 VCPP55072 806 aaKnown RBP2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZNF85Q03923 595 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 CBX3Q13185 183 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 CLPPQ16740 277 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZNF528Q3MIS6 628 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 ACER2Q5QJU3 275 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 OLFML2AQ68BL7 652 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 ETFRF1Q6IPR1 90 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 CWC27Q6UX04 472 aaKnown RBP2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 LUZP1Q86V48 1076 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 SLC22A18ASQ8N1D0 253 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 TMEM185AQ8NFB2 350 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 MRAPQ8TCY5 172 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 TMEM37Q8WXS4 190 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 MCCC1Q96RQ3 725 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 CBWD1Q9BRT8 395 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 ACAT2Q9BWD1 397 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 TRIM9Q9C026 710 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 HPS4Q9NQG7 708 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 RAI14Q9P0K7 980 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 COPS7AQ9UBW8 275 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 FAM153AQ9UHL3 310 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 IKZF3Q9UKT9 509 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZMYM6O95789 1325 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 NUP98P52948 1817 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 KIAA0232Q92628 1395 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 MAP3K5Q99683 1374 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 PLEKHG2Q9H7P9 1386 aa2.86□□□□□ -1.95
HMGB1P11-201ENST00000413899 NHSQ6T4R5 1651 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 DISP2A7MBM2 1401 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 TNS2Q63HR2 1409 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 SLIT2O94813 1529 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 DOCK2Q92608 1830 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 PDLIM1O00151 329 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 LRRTM2O43300 516 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 HSF2BPO75031 334 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 IGKV3-15P01624 115 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 IGHDP01880 384 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 KRTAP1-4P0C5Y4 121 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 IGFBP5P24593 272 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 SAA4P35542 130 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 NPY2RP49146 381 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 NT5C2P49902 561 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 SRP54P61011 504 aaKnown RBP2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 GFPT1Q06210 699 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 CRMP1Q14194 572 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 PPP1R3AQ16821 1122 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 MICAQ29983 383 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 CNPY1Q3B7I2 92 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 TIMM50Q3ZCQ8 353 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 TCHHL1Q5QJ38 904 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 PLBD1Q6P4A8 553 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 PAMR1Q6UXH9 720 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 APOOLQ6UXV4 268 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 BNIPLQ7Z465 357 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 RABEPKQ7Z6M1 372 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 YRDCQ86U90 279 aaKnown RBP2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 KLHL30-AS1Q8NEE0 82 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 URGCPQ8TCY9 931 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 U2AF1L4Q8WU68 220 aaKnown RBP2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 TMEM45BQ96B21 275 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 FTHL17Q9BXU8 183 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 DDX47Q9H0S4 455 aaKnown RBP2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 ABCG4Q9H172 646 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 RSPH9Q9H1X1 276 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 RNF41Q9H4P4 317 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 FAM124BQ9H5Z6 455 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 HOMER3Q9NSC5 361 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 IMPAD1Q9NX62 359 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 LHX3Q9UBR4 397 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 MIOXQ9UGB7 285 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 KCNN3Q9UGI6 736 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 PURGQ9UJV8 347 aaKnown RBP2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZNF175Q9Y473 711 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 MYO5AQ9Y4I1 1855 aaKnown RBP2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 MAPK8IP3Q9UPT6 1336 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 COL4A1P02462 1669 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 CPDO75976 1380 aa2.85□□□□□ -1.95
HMGB1P11-201ENST00000413899 BTAF1O14981 1849 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms