RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 IFNGR2P38484 337 aa8.53□□□□□ -1.04
PDPN-201ENST00000294489 ST13P50502 369 aaKnown RBP8.53□□□□□ -1.04
PDPN-201ENST00000294489 DUSP5Q16690 384 aa8.53□□□□□ -1.04
PDPN-201ENST00000294489 PRICKLE4Q2TBC4 344 aa8.53□□□□□ -1.04
PDPN-201ENST00000294489 PTCHD4Q6ZW05 846 aa8.53□□□□□ -1.04
PDPN-201ENST00000294489 SLC38A4Q969I6 547 aa8.53□□□□□ -1.04
PDPN-201ENST00000294489 FUZQ9BT04 418 aa8.53□□□□□ -1.04
PDPN-201ENST00000294489 FUNDC2Q9BWH2 189 aa8.53□□□□□ -1.04
PDPN-201ENST00000294489 ZNF226Q9NYT6 803 aa8.53□□□□□ -1.04
PDPN-201ENST00000294489 PSORS1C1Q9UIG5 152 aa8.53□□□□□ -1.04
PDPN-201ENST00000294489 MKLN1Q9UL63 735 aa8.53□□□□□ -1.04
PDPN-201ENST00000294489 MRPS33Q9Y291 106 aaKnown RBP8.53□□□□□ -1.04
PDPN-201ENST00000294489 COL27A1Q8IZC6 1860 aaPredicted RBP8.53□□□□□ -1.04
PDPN-201ENST00000294489 CACNA1EQ15878 2313 aa8.52□□□□□ -1.04
PDPN-201ENST00000294489 A0A1W2PPW3 197 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 SH3D21A4FU49 640 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 AP3D1O14617 1153 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 OR10H2O60403 315 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 SLC35E2P0CK97 266 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 GALNSP34059 522 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 MAP2K4P45985 399 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 GP2P55259 537 aaKnown RBP8.52□□□□□ -1.05
PDPN-201ENST00000294489 HSD11B2P80365 405 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 ST3GAL3Q11203 375 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 COL9A2Q14055 689 aaPredicted RBP8.52□□□□□ -1.05
PDPN-201ENST00000294489 SYT6Q5T7P8 510 aaPredicted RBP8.52□□□□□ -1.05
PDPN-201ENST00000294489 TMEM236Q5W0B7 351 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 FRRS1Q6ZNA5 592 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 RABEPKQ7Z6M1 372 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 CCDC103Q8IW40 242 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 OR4K5Q8NGD3 323 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 FCGR1BQ92637 280 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 ZG16BQ96DA0 208 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 ARHGDIGQ99819 225 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 RHNO1Q9BSD3 238 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 ZNF768Q9H5H4 540 aaKnown RBP8.52□□□□□ -1.05
PDPN-201ENST00000294489 GPN2Q9H9Y4 310 aaPredicted RBP8.52□□□□□ -1.05
PDPN-201ENST00000294489 ACOT13Q9NPJ3 140 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 DUSP22Q9NRW4 184 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 CLN6Q9NWW5 311 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 IRAK4Q9NWZ3 460 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 COL6A3P12111 3177 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 TRIM64BA6NI03 449 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 AK1P00568 194 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 ANKRD34CP0C6C1 535 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 ACP2P11117 423 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 GABRB1P18505 474 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 PSMB9P28065 219 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 AVPR1BP47901 424 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 RGS8P57771 180 aaPredicted RBP8.52□□□□□ -1.05
PDPN-201ENST00000294489 MAP4K2Q12851 820 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 HLA-BQ31612 363 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 EIPR1Q53HC9 387 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 CASP12Q6UXS9 341 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 RRM2BQ7LG56 351 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 ANKRD13BQ86YJ7 626 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 ZNF595Q8IYB9 648 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 COX18Q8N8Q8 333 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 CEP76Q8TAP6 659 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 FKBP10Q96AY3 582 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 NECAB3Q96P71 396 aaPredicted RBP8.52□□□□□ -1.05
PDPN-201ENST00000294489 STACQ99469 402 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 SDF2Q99470 211 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 AMBNQ9NP70 447 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 CTPS2Q9NRF8 586 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 SOHLH2Q9NX45 425 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 MAT2BQ9NZL9 334 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 REV1Q9UBZ9 1251 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 SATB2Q9UPW6 733 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 DNAH14Q0VDD8 3507 aa8.52□□□□□ -1.05
PDPN-201ENST00000294489 A0A0A6YYC8 382 aaPredicted RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 I3L1I5 382 aaPredicted RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 TPD52L2O43399 206 aaKnown RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 STX11O75558 287 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 SOX30O94993 753 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 SOX14O95416 240 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 RNH1P13489 461 aaKnown RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 GSTM3P21266 225 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 S1PR1P21453 382 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 NFATC3Q12968 1075 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 TRAM2Q15035 370 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 NR0B2Q15466 257 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 YOD1Q5VVQ6 348 aaPredicted RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 TYW3Q6IPR3 259 aaKnown RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 SLC23A3Q6PIS1 610 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 CD300LDQ6UXZ3 194 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 NLGN4XQ8N0W4 816 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 STX19Q8N4C7 294 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 ZBTB44Q8NCP5 570 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 SIMC1Q8NDZ2 872 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 GGHQ92820 318 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 MVB12AQ96EY5 273 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 Q96MT0 163 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 BCL7BQ9BQE9 202 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 SPRTNQ9H040 489 aaPredicted RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 ANKRD19PQ9H560 264 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 MAN2C1Q9NTJ4 1040 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 ENPP5Q9UJA9 477 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 ZNF443Q9Y2A4 671 aaPredicted RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 TGFBR3LH3BV60 316 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms