RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 G6PC3Q9BUM1 346 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SMOC2Q9H3U7 446 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 MYNNQ9NPC7 610 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 UBP1Q9NZI7 540 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 FBXO7Q9Y3I1 522 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 UBR2Q8IWV8 1755 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 BLOC1S5-TXNDC5H3BN57 136 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 PEX12O00623 359 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 DCXO43602 365 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ORC5O43913 435 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 GGCTO75223 188 aaKnown RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 RGS11O94810 467 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 GLCEO94923 617 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 IFNA21P01568 189 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 RPLP0P05388 317 aaKnown RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 OR56A5P0C7T3 313 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ANXA3P12429 323 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 GABRA1P14867 456 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 GABRR1P24046 479 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ZNF41P51814 821 aaPredicted RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ARF6P62330 175 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 CRYZQ08257 329 aaKnown RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 RCAN2Q14206 197 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 TRIP4Q15650 581 aaPredicted RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 DEFB115Q30KQ5 88 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 LRRC8EQ6NSJ5 796 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 MED25Q71SY5 747 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SPRED1Q7Z699 444 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 FGD2Q7Z6J4 655 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 PPP1R35Q8TAP8 253 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SCARB1Q8WTV0 552 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 TSEN15Q8WW01 171 aaKnown RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 HGDQ93099 445 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ARRDC3Q96B67 414 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 MFSD3Q96ES6 412 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 TCTN2Q96GX1 697 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 FUZQ9BT04 418 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SPATA5L1Q9BVQ7 753 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 CD244Q9BZW8 370 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 FAM96AQ9H5X1 160 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ZNF395Q9H8N7 513 aaPredicted RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SLC6A13Q9NSD5 602 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 MIOSQ9NXC5 875 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SLC17A6Q9P2U8 582 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 HIF3AQ9Y2N7 669 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 TBL2Q9Y4P3 447 aaKnown RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ARFGEF2Q9Y6D5 1785 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SLIT2O94813 1529 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 A0A1B0GW55 424 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ANXA2P2A6NMY6 339 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SLC16A3O15427 465 aaKnown RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SUSD5O60279 629 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 EPHX1P07099 455 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 DUX4L2P0CJ85 424 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 DUX4L3P0CJ86 424 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 DUX4L4P0CJ87 422 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 DUX4L5P0CJ88 424 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 DUX4L6P0CJ89 424 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 DUX4L7P0CJ90 424 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 CCL2P13500 99 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 PSMB9P28065 219 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 RPS9P46781 194 aaKnown RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 CCR8P51685 355 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 MLF1P58340 268 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 CHRNB3Q05901 458 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 OPCMLQ14982 345 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 C5orf64Q2M2E5 130 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ZNF284Q2VY69 593 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 CTXN3Q4LDR2 81 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SYTL3Q4VX76 610 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 TEX44Q53QW1 395 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 MOB2Q70IA6 237 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 APCDD1Q8J025 514 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ZNF614Q8N883 585 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 CYB561A3Q8NBI2 242 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 OR4D6Q8NGJ1 314 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 OR2G2Q8NGZ5 317 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 PRR7Q8TB68 274 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 SMIM12Q96EX1 92 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 PGAM5Q96HS1 289 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 TEX37Q96LM6 180 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 C12orf66Q96MD2 445 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 PTCHD1Q96NR3 888 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 FAM193BQ96PV7 902 aaPredicted RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ADAT1Q9BUB4 502 aaKnown RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 FKRPQ9H9S5 495 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 EIF2B3Q9NR50 452 aaKnown RBP7.3□□□□□ -1.24
GPNMB-201ENST00000258733 PGPEP1Q9NXJ5 209 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 DUX4Q9UBX2 424 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 ZNF222Q9UK12 451 aa7.3□□□□□ -1.24
GPNMB-201ENST00000258733 A0A1B0GV72 72 aa7.29□□□□□ -1.24
GPNMB-201ENST00000258733 C20orf202A1L168 122 aa7.29□□□□□ -1.24
GPNMB-201ENST00000258733 TCAF2A6NFQ2 919 aa7.29□□□□□ -1.24
GPNMB-201ENST00000258733 FAM171A2A8MVW0 826 aa7.29□□□□□ -1.24
GPNMB-201ENST00000258733 CLIC1O00299 241 aa7.29□□□□□ -1.24
GPNMB-201ENST00000258733 INPP4BO15327 924 aa7.29□□□□□ -1.24
GPNMB-201ENST00000258733 ARG1P05089 322 aa7.29□□□□□ -1.24
GPNMB-201ENST00000258733 RCC1P18754 421 aaPredicted RBP7.29□□□□□ -1.24
GPNMB-201ENST00000258733 ACO1P21399 889 aaKnown RBP7.29□□□□□ -1.24
GPNMB-201ENST00000258733 AZGP1P25311 298 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms