RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Cdc123Q8CII2 336 aa10.31□□□□□ -0.76
Msh3-201ENSMUST00000022220 Tmem17Q8K0U3 198 aa10.31□□□□□ -0.76
Msh3-201ENSMUST00000022220 Ahi1Q8K3E5 1047 aa10.31□□□□□ -0.76
Msh3-201ENSMUST00000022220 Lsm1Q8VC85 133 aa10.31□□□□□ -0.76
Msh3-201ENSMUST00000022220 Ogfrl1Q8VE52 464 aa10.31□□□□□ -0.76
Msh3-201ENSMUST00000022220 Olfr1461Q8VEV7 312 aa10.31□□□□□ -0.76
Msh3-201ENSMUST00000022220 Olfr808Q8VGI8 312 aa10.31□□□□□ -0.76
Msh3-201ENSMUST00000022220 Taar1Q923Y8 332 aa10.31□□□□□ -0.76
Msh3-201ENSMUST00000022220 MINDY3Q9CV28 444 aa10.31□□□□□ -0.76
Msh3-201ENSMUST00000022220 Mocs2Q9Z223 189 aa10.31□□□□□ -0.76
Msh3-201ENSMUST00000022220 Rhox2dW4VSN9 191 aa10.31□□□□□ -0.76
Msh3-201ENSMUST00000022220 Olfr1095A3KPP7 308 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Sult2a2P50236 285 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Zfp41Q02526 198 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Msto1Q2YDW2 556 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Galnt2Q6PB93 570 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 S100a15aQ6S5I3 108 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 HhipQ7TN16 700 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Oog2Q7TPX8 476 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 NapepldQ8BH82 396 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Q8K207 121 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Ttc36Q8VBW8 186 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Olfr811Q8VFI1 319 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Slc2a10Q8VHD6 536 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Eif3kQ9DBZ5 218 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Mrps15Q9DC71 258 aaKnown RBP10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Clca3a1Q9QX15 902 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Pla2g2fQ9QZT4 168 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Znf106O88466 1888 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Casp8ap2Q9WUF3 1962 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Ttc39aA2ACP1 578 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 4930595D18RikD3Z642 64 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Olfr640E9Q7P5 314 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Vmn2r12L7N217 831 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 P4ha2Q60716 537 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Pan3Q640Q5 837 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Dcaf13Q6PAC3 445 aaKnown RBP10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Syt16Q7TN83 639 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Ubr7Q8BU04 425 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Irak2Q8CFA1 622 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Rdh1Q8CGV4 317 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Vmn1r87Q8R255 295 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Tmcc3Q8R310 477 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Epsti1Q8VDI1 314 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Olfr643Q8VGY1 314 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Gtpbp3Q923K4 492 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Chmp1b2Q9CQD4 199 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Hhipl2Q9D2G9 717 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Vmn1r52Q9EP79 309 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Plscr3Q9JIZ9 296 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Calm4Q9JM83 148 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Acss2Q9QXG4 701 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Nfkb2Q9WTK5 899 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Skp1Q9WTX5 163 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Olfr49Q9Z1V0 313 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Gm13271B1AYH9 182 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 H60cB1B213 197 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Vmn1r169L7N275 304 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Cx3cl1O35188 395 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Hoxa9P09631 271 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Pou3f2P31360 445 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Slc6a11P31650 627 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 EpxP49290 716 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 OcmP51879 109 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Rab8bP61028 207 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Fgf1P61148 155 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Tmem64Q3U145 381 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Slc47a2Q3V050 573 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Il1rapQ61730 570 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 BpiQ67E05 483 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Ppp1r3eQ8BRJ4 279 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 BC024139Q8BVJ3 772 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Fbxl22Q8C7B6 236 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 H2afjQ8R1M2 129 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Rab28Q99KL7 221 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Med27Q9DB40 311 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 GmfgQ9ERL7 142 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Hapln2Q9ESM3 341 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 Rasal1Q9Z268 799 aa10.3□□□□□ -0.76
Msh3-201ENSMUST00000022220 BC034090A0A087WP46 1202 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Fam46aD3Z5S8 447 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Gm7951E9Q0A2 213 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 A430033K04RikE9Q8G5 680 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Gm6482F6YHC1 213 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Gm17124F6ZIG1 213 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Gm7970L7N271 213 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Gm8374L7N2A9 172 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Gm7980L7N471 213 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Cdk5r2O35926 369 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Nr4a1P12813 601 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 ThP24529 498 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Nup43P59235 380 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Khdc4Q3TCX3 612 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Il10rbQ61190 349 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Mep1bQ61847 704 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Galnt12Q8BGT9 576 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Trmt6Q8CE96 497 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Crispld1Q8CGD2 500 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Gas2l1Q8JZP9 678 aa10.29□□□□□ -0.76
Msh3-201ENSMUST00000022220 Med17Q8VCD5 649 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms