Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Ppp1r3eQ8BRJ4 Gm25239-201ENSMUST00000174915 86 ntBASIC32.26■■■□□ 2.75
Ppp1r3eQ8BRJ4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
Ppp1r3eQ8BRJ4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ppp1r3eQ8BRJ4 Psd-208ENSMUST00000224556 2034 ntBASIC30.82■■■□□ 2.52
Ppp1r3eQ8BRJ4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ppp1r3eQ8BRJ4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ppp1r3eQ8BRJ4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Ppp1r3eQ8BRJ4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ppp1r3eQ8BRJ4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ppp1r3eQ8BRJ4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ppp1r3eQ8BRJ4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ppp1r3eQ8BRJ4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Ppp1r3eQ8BRJ4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ppp1r3eQ8BRJ4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ppp1r3eQ8BRJ4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.12■■■□□ 2.25
Ppp1r3eQ8BRJ4 Gm15042-201ENSMUST00000120212 883 ntBASIC29.09■■■□□ 2.25
Ppp1r3eQ8BRJ4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ppp1r3eQ8BRJ4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ppp1r3eQ8BRJ4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ppp1r3eQ8BRJ4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ppp1r3eQ8BRJ4 Gm15045-201ENSMUST00000117359 883 ntBASIC28.68■■■□□ 2.18
Ppp1r3eQ8BRJ4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ppp1r3eQ8BRJ4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Ppp1r3eQ8BRJ4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Ppp1r3eQ8BRJ4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ppp1r3eQ8BRJ4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ppp1r3eQ8BRJ4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ppp1r3eQ8BRJ4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.24■■■□□ 2.11
Ppp1r3eQ8BRJ4 Gm24109-201ENSMUST00000175489 103 ntBASIC28.21■■■□□ 2.11
Ppp1r3eQ8BRJ4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Ppp1r3eQ8BRJ4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ppp1r3eQ8BRJ4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.11■■■□□ 2.09
Ppp1r3eQ8BRJ4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ppp1r3eQ8BRJ4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.09■■■□□ 2.09
Ppp1r3eQ8BRJ4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Ppp1r3eQ8BRJ4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Ppp1r3eQ8BRJ4 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.77■■■□□ 2.04
Ppp1r3eQ8BRJ4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ppp1r3eQ8BRJ4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Ppp1r3eQ8BRJ4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Ppp1r3eQ8BRJ4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.64■■■□□ 2.02
Ppp1r3eQ8BRJ4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Ppp1r3eQ8BRJ4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Ppp1r3eQ8BRJ4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.58■■■□□ 2.01
Ppp1r3eQ8BRJ4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Ppp1r3eQ8BRJ4 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.5■■□□□ 1.99
Ppp1r3eQ8BRJ4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ppp1r3eQ8BRJ4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ppp1r3eQ8BRJ4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ppp1r3eQ8BRJ4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ppp1r3eQ8BRJ4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ppp1r3eQ8BRJ4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ppp1r3eQ8BRJ4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Ppp1r3eQ8BRJ4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Ppp1r3eQ8BRJ4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ppp1r3eQ8BRJ4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ppp1r3eQ8BRJ4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ppp1r3eQ8BRJ4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ppp1r3eQ8BRJ4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ppp1r3eQ8BRJ4 Gm23366-201ENSMUST00000175022 89 ntBASIC27.03■■□□□ 1.92
Ppp1r3eQ8BRJ4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ppp1r3eQ8BRJ4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.93■■□□□ 1.9
Ppp1r3eQ8BRJ4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Ppp1r3eQ8BRJ4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ppp1r3eQ8BRJ4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ppp1r3eQ8BRJ4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ppp1r3eQ8BRJ4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ppp1r3eQ8BRJ4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ppp1r3eQ8BRJ4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.74■■□□□ 1.87
Ppp1r3eQ8BRJ4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ppp1r3eQ8BRJ4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ppp1r3eQ8BRJ4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ppp1r3eQ8BRJ4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Ppp1r3eQ8BRJ4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ppp1r3eQ8BRJ4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ppp1r3eQ8BRJ4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ppp1r3eQ8BRJ4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Ppp1r3eQ8BRJ4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Ppp1r3eQ8BRJ4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Ppp1r3eQ8BRJ4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ppp1r3eQ8BRJ4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ppp1r3eQ8BRJ4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.4■■□□□ 1.82
Ppp1r3eQ8BRJ4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ppp1r3eQ8BRJ4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Ppp1r3eQ8BRJ4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ppp1r3eQ8BRJ4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ppp1r3eQ8BRJ4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.22■■□□□ 1.79
Ppp1r3eQ8BRJ4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.18■■□□□ 1.78
Ppp1r3eQ8BRJ4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Ppp1r3eQ8BRJ4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ppp1r3eQ8BRJ4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ppp1r3eQ8BRJ4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ppp1r3eQ8BRJ4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ppp1r3eQ8BRJ4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.09■■□□□ 1.77
Ppp1r3eQ8BRJ4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ppp1r3eQ8BRJ4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ppp1r3eQ8BRJ4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ppp1r3eQ8BRJ4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ppp1r3eQ8BRJ4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 144 ms