RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TEX101Q9BY14 249 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 RACGAP1Q9H0H5 632 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 PRDM6Q9NQX0 595 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 PCDHGA4Q9Y5G9 962 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 PCDHGA2Q9Y5H1 932 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 CUL9Q8IWT3 2517 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 SCN8AQ9UQD0 1980 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 TRBV5-3A0A0A0MS03 114 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 PRAMEF25A6NGN4 478 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 A8MVJ9 347 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 C2orf74A8MZ97 194 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 C11orf98E9PRG8 122 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 HRKO00198 91 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 PLD2O14939 933 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 CDC40O60508 579 aaKnown RBP eCLIP7.04□□□□□ -1.285e-9■□□□□ 8.6
PKP4-217ENST00000628904 HCN1O60741 890 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 KLHL18O94889 574 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 IMPDH2P12268 514 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 CSTF2P33240 577 aaKnown RBP eCLIP7.04□□□□□ -1.288e-7■■■■□ 20.7
PKP4-217ENST00000628904 ACVR1BP36896 505 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 HSD17B2P37059 387 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 GCGRP47871 477 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 GP2P55259 537 aaKnown RBP7.04□□□□□ -1.28
PKP4-217ENST00000628904 ADPRMQ3LIE5 342 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 DESI1Q6ICB0 168 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 C16orf47Q6ZP98 133 aaPredicted RBP7.04□□□□□ -1.28
PKP4-217ENST00000628904 ZNF765Q7L2R6 523 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 TSPYL5Q86VY4 417 aaPredicted RBP7.04□□□□□ -1.28
PKP4-217ENST00000628904 CALHM3Q86XJ0 350 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 ZNF433Q8N7K0 673 aaPredicted RBP7.04□□□□□ -1.28
PKP4-217ENST00000628904 GPR32P1Q8NGA4 272 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 OR52R1Q8NGF1 315 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 UBASH3BQ8TF42 649 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.04□□□□□ -1.28
PKP4-217ENST00000628904 GAB3Q8WWW8 586 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 SLX1AQ9BQ83 275 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 ALOXE3Q9BYJ1 711 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 PRRG3Q9BZD7 231 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 DNAJC13O75165 2243 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 CD8B2A6NJW9 211 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 LOC110117498-PIK3R3F6TDL0 507 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 CTDSP2O14595 271 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 EMC8O43402 210 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 NDUFB5O43674 189 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 SCO2O43819 266 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 TNFRSF21O75509 655 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 CLEC3AO75596 197 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 CDRT1O95170 752 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 HTR1AP08908 422 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 CD8BP10966 210 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 PEPDP12955 493 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 PORP16435 677 aaPredicted RBP7.04□□□□□ -1.28
PKP4-217ENST00000628904 SERPINB1P30740 379 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 RPS27P42677 84 aaKnown RBP7.04□□□□□ -1.28
PKP4-217ENST00000628904 EIF2B2P49770 351 aaKnown RBP7.04□□□□□ -1.28
PKP4-217ENST00000628904 CRYBA2P53672 197 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 HCCSP53701 268 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 REEP5Q00765 189 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 INSL4Q14641 139 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 PDZK1Q5T2W1 519 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 KDM4DQ6B0I6 523 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 ACSM5Q6NUN0 579 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 FBXO42Q6P3S6 717 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 CCDC71Q8IV32 467 aaPredicted RBP7.04□□□□□ -1.28
PKP4-217ENST00000628904 TDHQ8IZJ6 230 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 DNAJC5GQ8N7S2 189 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 TTLQ8NG68 377 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 OR52L1Q8NGH7 329 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 OR52E4Q8NGH9 312 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 OR2L8Q8NGY9 312 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 OR8K3Q8NH51 312 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 PIGXQ8TBF5 258 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 CREB3L4Q8TEY5 395 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 MTERF3Q96E29 417 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 C7orf34Q96L11 122 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 SLC38A2Q96QD8 506 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 ITPAQ9BY32 194 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 HMG20AQ9NP66 347 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 ACOT13Q9NPJ3 140 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 MAPRE3Q9UPY8 281 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 ROS1P08922 2347 aa7.04□□□□□ -1.28
PKP4-217ENST00000628904 CHST10O43529 356 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 TMCC2O75069 709 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 DRD1P21728 446 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 MMP11P24347 488 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 PEBP1P30086 187 aaKnown RBP7.03□□□□□ -1.28
PKP4-217ENST00000628904 PKLRP30613 574 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 TTKP33981 857 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 SOX6P35712 828 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 XCR1P46094 333 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 CDH11P55287 796 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 CRYZQ08257 329 aaKnown RBP7.03□□□□□ -1.28
PKP4-217ENST00000628904 SNTA1Q13424 505 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 GBX1Q14549 363 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 ENTPD8Q5MY95 495 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 LNX2Q8N448 690 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 OR4K13Q8NH42 304 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 HPS1Q92902 700 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 ELP4Q96EB1 424 aa7.03□□□□□ -1.28
PKP4-217ENST00000628904 RAB11FIP5Q9BXF6 653 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms