RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ACP2P11117 423 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 GABRA3P34903 492 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 CNR2P34972 360 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 POLR2IP36954 125 aaKnown RBP10.38□□□□□ -0.75
SKA2-204ENST00000578519 STAT5AP42229 794 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 GABRA4P48169 554 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 IDH2P48735 452 aaKnown RBP10.38□□□□□ -0.75
SKA2-204ENST00000578519 FNTBP49356 437 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 DUSP3P51452 185 aaPredicted RBP10.38□□□□□ -0.75
SKA2-204ENST00000578519 PDX1P52945 283 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 OR1D5P58170 312 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 PPP1CAP62136 330 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 ACY1Q03154 408 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 SIGLEC14Q08ET2 396 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 FUT5Q11128 374 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 TARDBPQ13148 414 aaKnown RBP eCLIP10.38□□□□□ -0.75
SKA2-204ENST00000578519 SQSTM1Q13501 440 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 NEDD8Q15843 81 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 DUSP5Q16690 384 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 DECR1Q16698 335 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 TMEM44Q2T9K0 475 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 CTU2Q2VPK5 515 aaKnown RBP10.38□□□□□ -0.75
SKA2-204ENST00000578519 TRMT12Q53H54 448 aaKnown RBP10.38□□□□□ -0.75
SKA2-204ENST00000578519 MEDAGQ5VYS4 303 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 AP1ARQ63HQ0 302 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 ANKRD34AQ69YU3 496 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 FAM111BQ6SJ93 734 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 FRRS1Q6ZNA5 592 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 PTCHD4Q6ZW05 846 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 PRSS48Q7RTY5 328 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 PRSS41Q7RTY9 318 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 DGLUCYQ7Z3D6 616 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 RNF113BQ8IZP6 322 aaKnown RBP10.38□□□□□ -0.75
SKA2-204ENST00000578519 CYP4Z2PQ8N1L4 340 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 D2HGDHQ8N465 521 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 ARHGEF39Q8N4T4 335 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 OR9Q2Q8NGE9 314 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 ZFAND2BQ8WV99 257 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 GAB3Q8WWW8 586 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 EDAQ92838 391 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 NAT6Q93015 286 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 GTPBP3Q969Y2 492 aaKnown RBP10.38□□□□□ -0.75
SKA2-204ENST00000578519 NMD3Q96D46 503 aaKnown RBP10.38□□□□□ -0.75
SKA2-204ENST00000578519 PEX11GQ96HA9 241 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 CRELD1Q96HD1 420 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 MCHR1Q99705 422 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 NIPSNAP1Q9BPW8 284 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 LMF2Q9BU23 707 aaKnown RBP10.38□□□□□ -0.75
SKA2-204ENST00000578519 YIPF2Q9BWQ6 316 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 ZNF350Q9GZX5 532 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 HOXD1Q9GZZ0 328 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 RBM38Q9H0Z9 239 aaKnown RBP10.38□□□□□ -0.75
SKA2-204ENST00000578519 TMEM27Q9HBJ8 222 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 SELENONQ9NZV5 590 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 HCN3Q9P1Z3 774 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 RHCGQ9UBD6 479 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 SRPK3Q9UPE1 567 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 PCDHGA6Q9Y5G7 932 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 KCNE3Q9Y6H6 103 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 FANCMQ8IYD8 2048 aa10.38□□□□□ -0.75
SKA2-204ENST00000578519 IGHV5-51A0A0C4DH38 117 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 TRBV4-1A0A0J9YWV2 114 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 ZAR1LA6NP61 321 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 FFAR1O14842 300 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 PCDHGA12O60330 932 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 OR6B1O95007 311 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 NID1P14543 1247 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 DCKP27707 260 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 POU1F1P28069 291 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 CD1CP29017 333 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 LCN1P31025 176 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 TRHRP34981 398 aaPredicted RBP10.37□□□□□ -0.75
SKA2-204ENST00000578519 ST13P50502 369 aaKnown RBP10.37□□□□□ -0.75
SKA2-204ENST00000578519 SMSP52788 366 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 PSPHP78330 225 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 ID2Q02363 134 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 PMS2P3Q13401 168 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 PIN1Q13526 163 aaPredicted RBP10.37□□□□□ -0.75
SKA2-204ENST00000578519 RAB39AQ14964 217 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 PTGES3Q15185 160 aaKnown RBP10.37□□□□□ -0.75
SKA2-204ENST00000578519 GPR68Q15743 365 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 AMZ1Q400G9 498 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 EXOSC6Q5RKV6 272 aaKnown RBP10.37□□□□□ -0.75
SKA2-204ENST00000578519 PMS2CLQ68D20 193 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 TYW3Q6IPR3 259 aaKnown RBP10.37□□□□□ -0.75
SKA2-204ENST00000578519 ZNF770Q6IQ21 691 aaPredicted RBP10.37□□□□□ -0.75
SKA2-204ENST00000578519 C1orf94Q6P1W5 598 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 TMEM71Q6P5X7 295 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 PODNL1Q6PEZ8 512 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 ZNF730Q6ZMV8 503 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 ZNF550Q7Z398 422 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 B3GNT8Q7Z7M8 397 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 VRK2Q86Y07 508 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 CMIPQ8IY22 773 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 ZNF440Q8IYI8 595 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 ENTHD1Q8IYW4 607 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 GALNT15Q8N3T1 639 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 STX19Q8N4C7 294 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 OR4K5Q8NGD3 323 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 OR52R1Q8NGF1 315 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms