RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 DRD3P35462 400 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 GJC1P36383 396 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SLC1A2P43004 574 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CCR8P51685 355 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 NRG3P56975 720 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 NAA20P61599 178 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 RPS15P62841 145 aaKnown RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 ILF3Q12906 894 aaKnown RBP eCLIP2.54□□□□□ -2
PRPF39-206ENST00000554429 EIF3IQ13347 325 aaKnown RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 ATP1A4Q13733 1029 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ELAVL3Q14576 367 aaKnown RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 SLC9A3R2Q15599 337 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 MAPK11Q15759 364 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 KCNMB1Q16558 191 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ASTE1Q2TB18 679 aaPredicted RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 AP5B1Q2VPB7 878 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 GTDC1Q4AE62 458 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 MTX3Q5HYI7 312 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CCNYL2Q5T2Q4 361 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 PDZK1Q5T2W1 519 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 FAM46CQ5VWP2 391 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 KRT39Q6A163 491 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 TMEM220Q6QAJ8 160 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 KYAT3Q6YP21 454 aaKnown RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 DPPA4Q7L190 304 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 GPR141Q7Z602 305 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ZNF605Q86T29 641 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 PIGZQ86VD9 579 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ZFAND4Q86XD8 727 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 HIPK1Q86Z02 1210 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 NUDCD3Q8IVD9 361 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CYP4Z2PQ8N1L4 340 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 MARVELD2Q8N4S9 558 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CCDC197Q8NCU1 140 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 BEND2Q8NDZ0 799 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SPPL2AQ8TCT8 520 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 GPX8Q8TED1 209 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SLC35F5Q8WV83 523 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 PYDC1Q8WXC3 89 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CASKIN2Q8WXE0 1202 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 P3H4Q92791 437 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SEMA4DQ92854 862 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SLCO2A1Q92959 643 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ULK4Q96C45 1275 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ERLEC1Q96DZ1 483 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 MAP6Q96JE9 813 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 C9orf72Q96LT7 481 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 HEXIM2Q96MH2 286 aaKnown RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 C12orf57Q99622 126 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 BOCQ9BWV1 1114 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 DNTTIP1Q9H147 329 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ZCCHC4Q9H5U6 513 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CLMPQ9H6B4 373 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 RANBP3Q9H6Z4 567 aaPredicted RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 MARCH7Q9H992 704 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ROPN1Q9HAT0 212 aaPredicted RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 SERHLQ9NQF3 203 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ZC4H2Q9NQZ6 224 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CNOT2Q9NZN8 540 aaKnown RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 SLC25A10Q9UBX3 287 aaPredicted RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 NAGPAQ9UK23 515 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 FBXL3Q9UKT7 428 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 RAB21Q9UL25 225 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 MAB21L2Q9Y586 359 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SLCO1B1Q9Y6L6 691 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ZNF106Q9H2Y7 1883 aaKnown RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 CEP295Q9C0D2 2601 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SPEGQ15772 3267 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 IGF2RP11717 2491 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 LOC102723996A0A087X1L8 192 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ANXA2P2A6NMY6 339 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ZNF785A8K8V0 405 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 LRRN3E7EW58 273 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 NPIPA2E9PIF3 369 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 F8W036 122 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 PYCARD-AS1I3L0S3 204 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 KLF11O14901 512 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 PPM1DO15297 605 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SLC43A1O75387 559 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 STX11O75558 287 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 MOCS2O96007 188 aaPredicted RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 KRT8P05787 483 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 THBDP07204 575 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 THBS1P07996 1170 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 HOXC4P09017 264 aaPredicted RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 IRF1P10914 325 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 NME2P22392 152 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 EPHB2P29323 1055 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SLC6A6P31641 620 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SLC6A4P31645 630 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CD70P32970 193 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SOAT1P35610 550 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 MAP3K8P41279 467 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CYP2J2P51589 502 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SUOXP51687 545 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 VAV2P52735 878 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CDH4P55283 916 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 KCNJ2P63252 427 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 POU6F2P78424 691 aaPredicted RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 GPLD1P80108 840 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms