RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 RRM2BQ7LG56 351 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZNF367Q7RTV3 350 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 FAM160A2Q8N612 972 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 PIGXQ8TBF5 258 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 CLDN23Q96B33 292 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZDHHC12Q96GR4 267 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 POLDIP3Q9BY77 421 aaKnown RBP16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 C14orf105Q9NVL8 296 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 RPL36Q9Y3U8 105 aaKnown RBP16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 KRBA1A5PL33 1030 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 SNTNA6NMZ2 147 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 CLDN4O14493 209 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 KIAA0513O60268 411 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 BCAS1O75363 584 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 PTGER1P34995 402 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 MAP2K4P45985 399 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 SERPINB10P48595 397 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 SMSP52788 366 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 IGLV3-21P80748 117 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 TSPAN31Q12999 210 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 IRF3Q14653 427 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 CTF1Q16619 201 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 TMEM44Q2T9K0 475 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 DCST2Q5T1A1 773 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 COMTD1Q86VU5 262 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 VRK2Q86Y07 508 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 OR4N5Q8IXE1 308 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 COX18Q8N8Q8 333 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 GAB3Q8WWW8 586 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 ACOT11Q8WXI4 607 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 ANKRD9Q96BM1 317 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 FAM60AQ9NP50 221 aa16.13■□□□□ 0.17
TRAPPC11-204ENST00000505676 CCDC88CQ9P219 2028 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 SLC9B1P1A6NJY1 282 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 CHST10O43529 356 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 OR10H2O60403 315 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 MMP11P24347 488 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 POU1F1P28069 291 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 GALNSP34059 522 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 SLC15A1P46059 708 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 GSSP48637 474 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 POU6F2P78424 691 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZNHIT3Q15649 155 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 MOGQ16653 247 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 C14orf28Q4W4Y0 310 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 RASSF6Q6ZTQ3 369 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 PLEKHM3Q6ZWE6 761 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 PRSS41Q7RTY9 318 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 VWA5B2Q8N398 1253 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 FRMD1Q8N878 549 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 SLC35B4Q969S0 331 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 PALMDQ9NP74 551 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 ADAP2Q9NPF8 381 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 AASSQ9UDR5 926 aa16.12■□□□□ 0.17
TRAPPC11-204ENST00000505676 SGK494L7N484 410 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 CTNSO60931 367 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 RDH16O75452 317 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 NKX2-2O95096 273 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 NID1P14543 1247 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 STAT5AP42229 794 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 MLLT3P42568 568 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 AVPR1BP47901 424 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 EEF1A1P68104 462 aaKnown RBP16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 MGAT2Q10469 447 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 NR1D2Q14995 579 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 TRMT12Q53H54 448 aaKnown RBP16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZER1Q7Z7L7 766 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZNF761Q86XN6 746 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 FAM26EQ8N5C1 309 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 OIT3Q8WWZ8 545 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 WFDC6Q9BQY6 131 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 LMF2Q9BU23 707 aaKnown RBP16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 FITM1A5D6W6 292 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 H0YIG0 161 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 LDB3O75112 727 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 CLPXO76031 633 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 PPP1CAP62136 330 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 SNRPNP63162 240 aaKnown RBP16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 ST3GAL4Q11206 333 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 CCDC85BQ15834 202 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 PLAG1Q6DJT9 500 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZNF730Q6ZMV8 503 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZNF438Q7Z4V0 828 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 MRGPREQ86SM8 312 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 SFTPA2Q8IWL1 248 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 GALNT12Q8IXK2 581 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 CLDN22Q8N7P3 220 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 TEX47Q8TBZ9 253 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 DNASE2BQ8WZ79 361 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 MCHR1Q99705 422 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 PDE7BQ9NP56 450 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 NLGN3Q9NZ94 848 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 CSNK1G3Q9Y6M4 447 aa16.11■□□□□ 0.17
TRAPPC11-204ENST00000505676 FAM227AF5H4B4 570 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZNF749O43361 778 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 FCMRO60667 390 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 FPR3P25089 353 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 SOX18P35713 384 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 CDK5Q00535 292 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms