RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 TCTN3Q6NUS6 607 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 IKBIPQ70UQ0 350 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 VN1R4Q7Z5H5 301 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 VRK2Q86Y07 508 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 ZNF614Q8N883 585 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 TANKQ92844 425 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 OTULINQ96BN8 352 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 DDX31Q9H8H2 851 aaKnown RBP9.36□□□□□ -0.91
USP11-201ENST00000218348 IL21RQ9HBE5 538 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 HRASLS2Q9NWW9 162 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 CA14Q9ULX7 337 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 ERGIC3Q9Y282 383 aa9.36□□□□□ -0.91
USP11-201ENST00000218348 TRAV20A0A0B4J274 112 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 CPSF4LA6NMK7 179 aaKnown RBP9.35□□□□□ -0.91
USP11-201ENST00000218348 STK25O00506 426 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 MAN2B1O00754 1011 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 SEC14L2O76054 403 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 SEMA4FO95754 770 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 IGLV3-19P01714 112 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 ITGAMP11215 1152 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 CPN2P22792 545 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 DCKP27707 260 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 RAB15P59190 212 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 SGCAQ16586 387 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 FBXO42Q6P3S6 717 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 FAHD1Q6P587 224 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 IDO2Q6ZQW0 420 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 OR2L5Q8NG80 312 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 OR6T1Q8NGN1 323 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 MTERF3Q96E29 417 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 EPYCQ99645 322 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 TMEM38AQ9H6F2 299 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 TIGARQ9NQ88 270 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 MS4A12Q9NXJ0 267 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 ASB4Q9Y574 426 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 DNMT3AQ9Y6K1 912 aaPredicted RBP9.35□□□□□ -0.91
USP11-201ENST00000218348 K7ESF4 209 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 CH25HO95992 272 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 CKMT1AP12532 417 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 CTSEP14091 401 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 TTKP33981 857 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 RYKP34925 604 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 TSPAN7P41732 249 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 XCR1P46094 333 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 LSSP48449 732 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 PCBP3P57721 371 aaKnown RBP9.35□□□□□ -0.91
USP11-201ENST00000218348 SLC35A2P78381 396 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 MRPS15P82914 257 aaKnown RBP9.35□□□□□ -0.91
USP11-201ENST00000218348 MRPS21P82921 87 aaKnown RBP9.35□□□□□ -0.91
USP11-201ENST00000218348 ALDH6A1Q02252 535 aaKnown RBP9.35□□□□□ -0.91
USP11-201ENST00000218348 SIGLEC14Q08ET2 396 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 RBBP4Q09028 425 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 ILF3Q12906 894 aaKnown RBP eCLIP9.35□□□□□ -0.91
USP11-201ENST00000218348 CLEC12AQ5QGZ9 265 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 PTCHD4Q6ZW05 846 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 ZNF605Q86T29 641 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 STX19Q8N4C7 294 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 SLC16A11Q8NCK7 471 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 SUN3Q8TAQ9 357 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 TBC1D15Q8TC07 691 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 RELTQ969Z4 430 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 FOXQ1Q9C009 403 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 NEUROD4Q9HD90 331 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 ANKMY1Q9P2S6 941 aa9.35□□□□□ -0.91
USP11-201ENST00000218348 M0R3G1 203 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 HYAL3O43820 417 aaPredicted RBP9.34□□□□□ -0.91
USP11-201ENST00000218348 SDC3O75056 442 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 CPNE6O95741 557 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 UGT2B7P16662 529 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 XKP51811 444 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 VSX2P58304 361 aaPredicted RBP9.34□□□□□ -0.91
USP11-201ENST00000218348 MADCAM1Q13477 382 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 ERV3-1Q14264 604 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 GTF2IRD2BQ6EKJ0 949 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 FAM111BQ6SJ93 734 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 GTF2IRD2Q86UP8 949 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 NUP43Q8NFH3 380 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 SLC7A13Q8TCU3 470 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 YTHDF1Q9BYJ9 559 aaKnown RBP9.34□□□□□ -0.91
USP11-201ENST00000218348 PRMT8Q9NR22 394 aaPredicted RBP9.34□□□□□ -0.91
USP11-201ENST00000218348 EMC3Q9P0I2 261 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 P2RX2Q9UBL9 471 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 GMEB2Q9UKD1 530 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 GPR55Q9Y2T6 319 aaPredicted RBP9.34□□□□□ -0.91
USP11-201ENST00000218348 HCN4Q9Y3Q4 1203 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 PCDHGA2Q9Y5H1 932 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 ZNF780BQ9Y6R6 833 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 KPNA4O00629 521 aaPredicted RBP9.34□□□□□ -0.91
USP11-201ENST00000218348 SCO2O43819 266 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 SELLP14151 372 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 ITGA2P17301 1181 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 CSNK2A2P19784 350 aaPredicted RBP9.34□□□□□ -0.91
USP11-201ENST00000218348 M6PRP20645 277 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 PCMT1P22061 227 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 CHMP24386 653 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 PPP2R1BP30154 601 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 GPLD1P80108 840 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 MED22Q15528 200 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 GPR68Q15743 365 aa9.34□□□□□ -0.91
USP11-201ENST00000218348 NNATQ16517 81 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms