RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 TRGV5A0A0B4J1U4 118 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 PRPS1L1P21108 318 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 BGNP21810 368 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 IL12BP29460 328 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 FRKP42685 505 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-204ENST00000553324 MAN2A2P49641 1150 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 PSMD4P55036 377 aaKnown RBP14.06□□□□□ -0.16
SHMT2-204ENST00000553324 ART3Q13508 389 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 VPS26BQ4G0F5 336 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 IL23RQ5VWK5 629 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 ATG16L1Q676U5 607 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 FGD2Q7Z6J4 655 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 MRGPRGQ86SM5 289 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 SLC44A2Q8IWA5 706 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-204ENST00000553324 LRRC34Q8IZ02 419 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 LIX1Q8N485 282 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 ZNF808Q8N4W9 903 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-204ENST00000553324 ANKRD42Q8N9B4 389 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 RAB3IL1Q8TBN0 382 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 HGDQ93099 445 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 SARAFQ96BY9 339 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 SLC35A4Q96G79 324 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 TP63Q9H3D4 680 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-204ENST00000553324 EXO5Q9H790 373 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 ZNF703Q9H7S9 590 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-204ENST00000553324 ANKRA2Q9H9E1 313 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 Q9N2J8 555 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 THAP1Q9NVV9 213 aa14.06□□□□□ -0.16
SHMT2-204ENST00000553324 NOP53Q9NZM5 478 aaKnown RBP14.06□□□□□ -0.16
SHMT2-204ENST00000553324 USP9YO00507 2555 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-204ENST00000553324 HECTD1Q9ULT8 2610 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 A1L4Q6 167 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 NPIPA2E9PIF3 369 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 NPIPA3F8WFD2 350 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 SCAMP2O15127 329 aaKnown RBP14.05□□□□□ -0.16
SHMT2-204ENST00000553324 ICOSLGO75144 302 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 UGT2B11O75310 529 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 PSMG1O95456 288 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 HOXD4P09016 255 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-204ENST00000553324 PSG6Q00889 435 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 ZNF155Q12901 538 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-204ENST00000553324 HSPB3Q12988 150 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 GXYLT1Q4G148 440 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 CPTPQ5TA50 214 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 TIGD3Q6B0B8 471 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 ANKRD26P1Q6NSI1 321 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 ZCCHC12Q6PEW1 402 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 LARP4Q71RC2 724 aaKnown RBP eCLIP14.05□□□□□ -0.16
SHMT2-204ENST00000553324 ZNF551Q7Z340 670 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-204ENST00000553324 OR1J4Q8NGS1 313 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 CLHC1Q8NHS4 586 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 CIDECQ96AQ7 238 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-204ENST00000553324 ZBTB9Q96C00 473 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 TLCD1Q96CP7 247 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 NTNG2Q96CW9 530 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 PHF12Q96QT6 1004 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 ADOQ96SZ5 270 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 ARGLU1Q9NWB6 273 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-204ENST00000553324 ASIC5Q9NY37 505 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 KLRF1Q9NZS2 232 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 NTMQ9P121 344 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 ACAD8Q9UKU7 415 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 PCDHGB3Q9Y5G1 929 aa14.05□□□□□ -0.16
SHMT2-204ENST00000553324 A0A1W2PRB8 838 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 LRRC3CA6NJW4 275 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 FIGNL2A6NMB9 653 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 TSPAN2O60636 221 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 CBR3O75828 277 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 TRAPPC6AO75865 159 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 SOX30O94993 753 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 CLDN1O95832 211 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 RFPL3SP0C7P2 107 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 GDF1P27539 372 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 CORO7P57737 925 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 PRR5P85299 388 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 BST1Q10588 318 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 PDCD2Q16342 344 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-204ENST00000553324 DECR1Q16698 335 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 LSM12Q3MHD2 195 aaKnown RBP14.04□□□□□ -0.16
SHMT2-204ENST00000553324 WLSQ5T9L3 541 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 AGBL2Q5U5Z8 902 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 CES4AQ5XG92 561 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 NPSR1Q6W5P4 371 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 CD163Q86VB7 1156 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 NEIL3Q8TAT5 605 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 ITLN2Q8WWU7 325 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-204ENST00000553324 COQ8BQ96D53 544 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 GNRHR2Q96P88 292 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 NODALQ96S42 347 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 SORT1Q99523 831 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 LMF2Q9BU23 707 aaKnown RBP14.04□□□□□ -0.16
SHMT2-204ENST00000553324 OSBPL11Q9BXB4 747 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 C20orf27Q9GZN8 174 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 ZNF395Q9H8N7 513 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-204ENST00000553324 AKTIPQ9H8T0 292 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 COQ3Q9NZJ6 369 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 CBLCQ9ULV8 474 aa14.04□□□□□ -0.16
SHMT2-204ENST00000553324 KLF2Q9Y5W3 355 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-204ENST00000553324 PTPN13Q12923 2485 aa14.03□□□□□ -0.16
SHMT2-204ENST00000553324 DOPEY1Q5JWR5 2465 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms