RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 GABARAPO95166 117 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TTC4O95801 387 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 APOC3P02656 99 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 RPN2P04844 631 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 GABRA1P14867 456 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 BMP7P18075 431 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 SAT1P21673 171 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TBXA2RP21731 343 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 MNDAP41218 407 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TMEM33P57088 247 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 DNAJB13P59910 316 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 RAB11AP62491 216 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 RPL23AP62750 156 aaKnown RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 RPS6P62753 249 aaKnown RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CSNK2A1P68400 391 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 KLF1Q13351 362 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 GAB1Q13480 694 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 RAB31Q13636 194 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CARTPTQ16568 116 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ZNF404Q494X3 552 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TBCELQ5QJ74 424 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 EIF5AL1Q6IS14 154 aaKnown RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 DEF8Q6ZN54 512 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 QSOX2Q6ZRP7 698 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PDZD3Q86UT5 571 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 MOGAT3Q86VF5 341 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 NLGN4XQ8N0W4 816 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 C15orf54Q8N8G6 183 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CSNK2A3Q8NEV1 391 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 NLGN4YQ8NFZ3 816 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OR10W1Q8NGF6 305 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OR51L1Q8NGJ5 315 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OR9Q1Q8NGQ5 310 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OR4Q3Q8NH05 313 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OR5K1Q8NHB7 308 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 SUN3Q8TAQ9 357 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 WDR20Q8TBZ3 569 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CD200R1Q8TD46 325 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 RNF133Q8WVZ7 376 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 LCN9Q8WX39 176 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TFAP2CQ92754 450 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TMEM186Q96B77 213 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ARSGQ96EG1 525 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TMEM19Q96HH6 336 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 SCLYQ96I15 445 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ZNF512Q96ME7 567 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CNN2Q99439 309 aaKnown RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 SLC38A3Q99624 504 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 WRAP53Q9BUR4 548 aaKnown RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TLR10Q9BXR5 811 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 REG4Q9BYZ8 158 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 DPH1Q9BZG8 443 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 NRSN2Q9GZP1 204 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 NIF3L1Q9GZT8 377 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ZFYVE1Q9HBF4 777 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 RHOFQ9HBH0 211 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 EML4Q9HC35 981 aaKnown RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 FZD3Q9NPG1 666 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 MARCH4Q9P2E8 410 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ZDHHC2Q9UIJ5 367 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ZNF337Q9Y3M9 751 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PCDHA13Q9Y5I0 950 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ARL5AQ9Y689 179 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TRAV25A0A0B4J276 109 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 FAM240BA0A1B0GVZ2 78 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 OR14I1A6ND48 311 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 FAM171A2A8MVW0 826 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 D6RAR5 112 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 KLRC4-KLRK1H3BQV0 150 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 M0R036 132 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 TGOLN2O43493 480 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 KDELR3O43731 214 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 SUSD5O60279 629 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 SRPX2O60687 465 aaPredicted RBP4.86□□□□□ -1.63
UBE4A-203ENST00000545354 AQP8O94778 261 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 AP2A2O94973 939 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 VAMP5O95183 116 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 HOXC6P09630 235 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 OR8U8P0C7N1 319 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 C1GALT1C1LP0DN25 315 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 TPH1P17752 444 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 NELFEP18615 380 aaKnown RBP4.86□□□□□ -1.63
UBE4A-203ENST00000545354 EPHA1P21709 976 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 TUBG1P23258 451 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 MYL9P24844 172 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 IVDP26440 423 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 CD82P27701 267 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 IFNGR2P38484 337 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 CYB561P49447 251 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 NDUFV1P49821 464 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 FAM189BP81408 668 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 SSBP2P81877 361 aaPredicted RBP4.86□□□□□ -1.63
UBE4A-203ENST00000545354 ELAVL2Q12926 359 aaKnown RBP4.86□□□□□ -1.63
UBE4A-203ENST00000545354 TRAF3Q13114 568 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 ABRAXAS2Q15018 415 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 AGERQ15109 404 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 PTGES3Q15185 160 aaKnown RBP4.86□□□□□ -1.63
UBE4A-203ENST00000545354 NR6A1Q15406 480 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 CEBPEQ15744 281 aa4.86□□□□□ -1.63
UBE4A-203ENST00000545354 ZNF628Q5EBL2 1059 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms