RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 STAG3L4Q8TBR4 150 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 SMAP2Q8WU79 429 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 APH1BQ8WW43 257 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 TM9SF4Q92544 642 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 NR4A3Q92570 626 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 DIO2Q92813 273 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 TRIM43Q96BQ3 446 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 MRPS24Q96EL2 167 aaKnown RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 P2RY11Q96G91 374 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 LRFN5Q96NI6 719 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 OR4K3Q96R72 315 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 NEU1Q99519 415 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 LGMNQ99538 433 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 FDXACB1Q9BRP7 624 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 PI4K2AQ9BTU6 479 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 THUMPD3Q9BV44 507 aaKnown RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CPEB1Q9BZB8 566 aaKnown RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 SEMA4CQ9C0C4 833 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 SPRTNQ9H040 489 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 HDHD2Q9H0R4 259 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 ABCG5Q9H222 651 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 MTG2Q9H4K7 406 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 REEP4Q9H6H4 257 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 EVA1AQ9H8M9 152 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 APOBEC3GQ9HC16 384 aaKnown RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 MID1IP1Q9NPA3 183 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 NANSQ9NR45 359 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 SMCO4Q9NRQ5 59 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 NLE1Q9NVX2 485 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 TAS2R3Q9NYW6 316 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 WWOXQ9NZC7 414 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 KCMF1Q9P0J7 381 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 KLHL8Q9P2G9 620 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 GPR160Q9UJ42 338 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 HACL1Q9UJ83 578 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF490Q9ULM2 529 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CBLCQ9ULV8 474 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 NDRG2Q9UN36 371 aaKnown RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 PPIEQ9UNP9 301 aaKnown RBP4.59□□□□□ -1.67
SF3B1-207ENST00000468925 SLC22A7Q9Y694 548 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 CLCA3PQ9Y6N3 262 aa4.59□□□□□ -1.67
SF3B1-207ENST00000468925 ITGB4P16144 1822 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SSC5DA1L4H1 1573 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 A0A087WV62 115 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM129A0AVI4 362 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 C9orf170A2RU37 121 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 OR14I1A6ND48 311 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 METTL21EPA6NDL7 271 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 GLTPD2A6NH11 291 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SLC22A31A6NKX4 558 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 RFPL4AA6NLU0 287 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 AGAP14A8MT82 685 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 MYO1GB0I1T2 1018 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM233B4DJY2 109 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 MCRIP1C9JLW8 97 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 FAM227AF5H4B4 570 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 RFPL4AL1F8VTS6 287 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 NPIPB9F8W1W9 429 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 I6L893 689 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SMIM22K7EJ46 135 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CLIC1O00299 241 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CACNB4O00305 520 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 B4GALT5O43286 388 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 SMAD6O43541 496 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 TGM5O43548 720 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 RGS14O43566 566 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CACNG3O60359 315 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 TPST2O60704 377 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 HPGDSO60760 199 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ENTPD6O75354 484 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 OR2A4O95047 310 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CDRT1O95170 752 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 STBD1O95210 358 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 GADD45GO95257 159 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 PTHP01270 115 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 MT-ND4LP03901 98 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 TCRBP04435 133 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 HLA-DPB1P04440 258 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CYP17A1P05093 508 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 EPHX1P07099 455 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 STSP08842 583 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ZGLP1P0C6A0 271 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 LINC00614P0C842 121 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 GKN3PP0CG01 181 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 DAOP14920 347 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 IFNGR1P15260 489 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CD19P15391 556 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 RPA2P15927 270 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF37AP17032 561 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 PFKLP17858 780 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 GABRB1P18505 474 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 S1PR1P21453 382 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 C5AR1P21730 350 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 AHCYP23526 432 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 AZGP1P25311 298 aaKnown RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 PSMB4P28070 264 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 CRABP1P29762 137 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 C21orf33P30042 268 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-207ENST00000468925 HOXA9P31269 272 aa4.58□□□□□ -1.68
SF3B1-207ENST00000468925 HOXC8P31273 242 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms