RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 RIT1Q92963 219 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 RBM18Q96H35 190 aaKnown RBP10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 ALOXE3Q9BYJ1 711 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 MTHFD2LQ9H903 347 aaPredicted RBP10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 WDFY4Q6ZS81 3184 aa10.68□□□□□ -0.7
SMARCAL1-203ENST00000392128 CPED1A4D0V7 1026 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 A8MU76 341 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 E9PQ18 207 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 BCKDKO14874 412 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 FCMRO60667 390 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 CDC123O75794 336 aaPredicted RBP10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 CER1O95813 267 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 AK1P00568 194 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 S1PR1P21453 382 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 GALNSP34059 522 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 POLR2IP36954 125 aaKnown RBP10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 STT3AP46977 705 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 BTG2P78543 158 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF528Q3MIS6 628 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 SLC23A3Q6PIS1 610 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 DHRS4L2Q6PKH6 230 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 DEF8Q6ZN54 512 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 TTLL10Q6ZVT0 673 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 RBM45Q8IUH3 476 aaKnown RBP10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 SLC5A8Q8N695 610 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 DOK4Q8TEW6 326 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 NAT6Q93015 286 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF501Q96CX3 271 aaPredicted RBP10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF578Q96N58 590 aaPredicted RBP10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 OR1F2PQ96R84 312 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 SDF2Q99470 211 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 FEVQ99581 238 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 WFDC6Q9BQY6 131 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 PELOQ9BRX2 385 aaKnown RBP10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 GABARAPL3Q9BY60 117 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF350Q9GZX5 532 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 QRSL1Q9H0R6 528 aaKnown RBP10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 RIBC2Q9H4K1 309 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 NMNAT1Q9HAN9 279 aaPredicted RBP10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 SERTAD3Q9UJW9 196 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 GMEB2Q9UKD1 530 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 SLC6A14Q9UN76 642 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 CDC14AQ9UNH5 594 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 IFT52Q9Y366 437 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 HCN4Q9Y3Q4 1203 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 WDR45Q9Y484 360 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZDBF2Q9HCK1 2354 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 M0R3H8 397 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 PCDH17O14917 1159 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 CCNB2O95067 398 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 CPNE6O95741 557 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 RYKP34925 604 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 RPL5P46777 297 aaKnown RBP10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 SMIM11AP58511 58 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 TUBA4AP68366 448 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 IL1RL1Q01638 556 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 DUSP8Q13202 625 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 SERTAD2Q14140 314 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 ERV3-1Q14264 604 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 DCST2Q5T1A1 773 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF574Q6ZN55 896 aaPredicted RBP10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 OR52R1Q8NGF1 315 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZG16BQ96DA0 208 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 DGAT2Q96PD7 388 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 ALPK1Q96QP1 1244 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 ARHGDIGQ99819 225 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 NDC1Q9BTX1 674 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 LMF2Q9BU23 707 aaKnown RBP10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 SAP130Q9H0E3 1048 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 ING2Q9H160 280 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 FANCEQ9HB96 536 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 LANCL2Q9NS86 450 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 TUBA8Q9NY65 449 aaPredicted RBP10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 RHCGQ9UBD6 479 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 A4GNTQ9UNA3 340 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 POFUT2Q9Y2G5 429 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 PCDHGA8Q9Y5G5 932 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 MAU2Q9Y6X3 613 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 HSPE1-MOB4S4R3N1 261 aa10.67□□□□□ -0.7
SMARCAL1-203ENST00000392128 A0A1W2PQM1 296 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 PATE3B3GLJ2 98 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 ARHGAP33O14559 1287 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 NKX2-2O95096 273 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 TFAP2AP05549 437 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 H1F0P07305 194 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 MAOAP21397 527 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 CLK3P49761 638 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 TPD52P55327 224 aaPredicted RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 ISL1P61371 349 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 NPRL3Q12980 569 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 DSG2Q14126 1118 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 TRIM61Q5EBN2 209 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 TMPRSS9Q7Z410 1059 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 HMGN2P46Q86SG4 172 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 VRK2Q86Y07 508 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 TAGAPQ8N103 731 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 EID2Q8N6I1 236 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 COX18Q8N8Q8 333 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZBTB44Q8NCP5 570 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 SETD9Q8NE22 299 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms