RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Sult4a1P63046 284 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 C2cd4bQ80XU5 340 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Enpp6Q8BGN3 440 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Frmd6Q8C0V9 622 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tmem268Q8R239 342 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Slco1a6Q99J94 670 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Steap1Q9CWR7 339 aa9.69□□□□□ -0.86
Ubr1-201ENSMUST00000028728 4930595M18RikA2RRY9 829 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 MatkP41242 505 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 VldlrP98156 873 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Apoc2Q05020 97 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Slc37a3Q3TIT8 494 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Clns1aQ61189 236 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Krt33bQ61897 404 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Spock1Q62288 442 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr1128Q7TR47 311 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Carnmt1Q80UY1 400 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Eif5a2Q8BGY2 153 aaKnown RBP9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Lmcd1Q8VEE1 365 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr539Q8VGL9 319 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Q91W34 466 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 9230104L09RikQ9D264 133 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tmem185aA2AF53 350 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Btnl4A2CG29 586 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gja5Q01231 358 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cnn2Q08093 305 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Defb23Q30KP0 166 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pon3Q62087 354 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Iqcf4Q6P8Y2 204 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr836Q8VFJ3 317 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr643Q8VGY1 314 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Fmo4Q8VHG0 560 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 2010109A12RikQ9D875 119 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tlr1Q9EPQ1 795 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Nrxn3Q6P9K9 1571 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rab11fip2G3XA57 512 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Il13ra1O09030 424 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cd14P10810 366 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Hoxd12P23812 268 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 PfkmP47857 780 aaKnown RBP9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Acss3Q14DH7 682 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Lrrc28Q3TX51 367 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Elp6Q8BK75 266 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gpr20Q8BYC4 358 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr437Q8VEV1 310 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zswim2Q9D9X6 631 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cacna1cQ01815 2139 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zfp534A2A7A1 661 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr1112A2ATA0 318 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rpl3lE9PWZ3 407 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr550E9Q544 316 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Taf6Q62311 678 aaKnown RBP9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 B430306N03RikQ6QX36 289 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rpl10Q6ZWV3 214 aaKnown RBP9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 FukQ7TMC8 1090 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Acot4Q8BWN8 421 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Piwil4Q8CGT6 848 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Dhrs4Q99LB2 279 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ccdc166S4R181 449 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr560A0A1B0GSU5 314 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ggta1l1A2AUQ7 319 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ssxa1B1AUS7 101 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Mrap2D3Z1Q2 207 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr1425K7N659 312 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pld3O35405 488 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tgfb3P17125 410 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 PthlhP22858 175 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Btg1P62325 171 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cry1P97784 606 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 2700097O09RikQ6PGK3 301 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Hspa12aQ8K0U4 675 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr1426Q8VG74 311 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cited4Q9WUL8 182 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pcdh10E9PXQ7 1057 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr640E9Q7P5 314 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn2r10K7N621 847 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rnf13O54965 381 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rad52P43352 420 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Sox3P53784 375 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Itgb8Q0VBD0 767 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm853Q3UNZ2 425 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ankrd28Q505D1 1053 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Dag1Q62165 893 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Orm3Q63805 206 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Fbxl19Q6PB97 674 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Fbxl3Q8C4V4 428 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 EfhbQ8CDU5 853 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 GmdsQ8K0C9 372 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Nmral1Q8K2T1 309 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Fbxo36Q9CQ24 188 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cd302Q9DCG2 228 aa9.68□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn2r34E9PVI0 852 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn2r41E9Q5C7 852 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn2r40F6W043 852 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn2r37F8VQD3 802 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn2r36K7N741 852 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Phb2O35129 299 aaKnown RBP9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ppt1O88531 306 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 HgsnatQ3UDW8 656 aa9.67□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Arhgef39Q66JY6 344 aa9.67□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms