RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 BROXQ5VW32 411 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 FOXB2Q5VYV0 432 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 BBS10Q8TAM1 723 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 DGCR14Q96DF8 476 aaKnown RBP14.75□□□□□ -0.05
CPSF1-213ENST00000620219 DEPDC7Q96QD5 511 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 CD320Q9NPF0 282 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 KRCC1Q9NPI7 259 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-213ENST00000620219 C8orf4Q9NR00 106 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 CACNA1CQ13936 2221 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 LRRK1Q38SD2 2015 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 PLXNB3Q9ULL4 1909 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 IL12BP29460 328 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 CLK1P49759 484 aaKnown RBP14.75□□□□□ -0.05
CPSF1-213ENST00000620219 TXNL4AP83876 142 aaKnown RBP14.75□□□□□ -0.05
CPSF1-213ENST00000620219 RNF165Q6ZSG1 346 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 SPRED1Q7Z699 444 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 RANBP3LQ86VV4 465 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-213ENST00000620219 TANKQ92844 425 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 UBE2FQ969M7 185 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 DUSP23Q9BVJ7 150 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 NLGN3Q9NZ94 848 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 IL20RAQ9UHF4 553 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 PCOLCE2Q9UKZ9 415 aa14.75□□□□□ -0.05
CPSF1-213ENST00000620219 C17orf105B2RV13 164 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 SNAPC1Q16533 368 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 C1orf210Q8IVY1 113 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 NLGN4XQ8N0W4 816 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 OR7G2Q8NG99 324 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 TEX47Q8TBZ9 253 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 PHOSPHO1Q8TCT1 267 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 SGCDQ92629 289 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 OR6C1Q96RD1 312 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 ENPP4Q9Y6X5 453 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 SMIM31A0A1B0GVY4 71 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 VILLO15195 856 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 GALR3O60755 368 aaPredicted RBP14.74□□□□□ -0.05
CPSF1-213ENST00000620219 CTSBP07858 339 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 SYPP08247 313 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 CD47Q08722 323 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 TMEM236Q5W0B7 351 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 MR1Q95460 341 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 CNDP2Q96KP4 475 aaKnown RBP14.74□□□□□ -0.05
CPSF1-213ENST00000620219 LIPT1Q9Y234 373 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 HCN4Q9Y3Q4 1203 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 PCDH17O14917 1159 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 BMP7P18075 431 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 ITGA1P56199 1179 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 TOMM20Q15388 145 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 ADRM1Q16186 407 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 VWA2Q5GFL6 755 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 TMEM64Q6YI46 380 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 CXorf21Q9HAI6 301 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 EPHA6Q9UF33 1036 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 PNMA8CA0A1B0GUJ8 204 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 HEXBP07686 556 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 EPHA2P29317 976 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 RPL4P36578 427 aaKnown RBP14.74□□□□□ -0.05
CPSF1-213ENST00000620219 UBE2IP63279 158 aaKnown RBP14.74□□□□□ -0.05
CPSF1-213ENST00000620219 GUSBP11Q6P575 273 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 CALHM3Q86XJ0 350 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 TMEM151BQ8IW70 566 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 OR6C4Q8NGE1 309 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 DUS3LQ96G46 650 aaKnown RBP14.74□□□□□ -0.05
CPSF1-213ENST00000620219 OSBPL10Q9BXB5 764 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 TMEM74BQ9NUR3 256 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 ENOPH1Q9UHY7 261 aa14.74□□□□□ -0.05
CPSF1-213ENST00000620219 HMGN4O00479 90 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 PCDHGA12O60330 932 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 STX11O75558 287 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 AGR2O95994 175 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 MYF6P23409 242 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 GSTM5P46439 218 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 NDUFA13Q9P0J0 144 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 C4orf51C9J302 202 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 ZNF749O43361 778 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 SIGLEC6O43699 453 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 FCMRO60667 390 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 ERGP11308 486 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 MLLT10P55197 1068 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 SMN1Q16637 294 aaKnown RBP14.73□□□□□ -0.05
CPSF1-213ENST00000620219 COLEC12Q5KU26 742 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 METTL25Q8N6Q8 603 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.73□□□□□ -0.05
CPSF1-213ENST00000620219 ZBTB20Q9HC78 741 aaPredicted RBP14.73□□□□□ -0.05
CPSF1-213ENST00000620219 ZNF304Q9HCX3 659 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 A8MVJ9 347 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 SMIM18P0DKX4 95 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 CD1CP29017 333 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 RPP38P78345 283 aaKnown RBP14.73□□□□□ -0.05
CPSF1-213ENST00000620219 NR1D2Q14995 579 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 ZNF658BQ4V348 819 aaPredicted RBP14.73□□□□□ -0.05
CPSF1-213ENST00000620219 KLHL12Q53G59 568 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 ZNF696Q9H7X3 374 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 USE1Q9NZ43 259 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 RSL24D1Q9UHA3 163 aaKnown RBP14.73□□□□□ -0.05
CPSF1-213ENST00000620219 KCNE3Q9Y6H6 103 aa14.73□□□□□ -0.05
CPSF1-213ENST00000620219 HCRTR1O43613 425 aa14.72□□□□□ -0.05
CPSF1-213ENST00000620219 CNOT3O75175 753 aaKnown RBP14.72□□□□□ -0.05
CPSF1-213ENST00000620219 KLK3P07288 261 aaPredicted RBP14.72□□□□□ -0.05
CPSF1-213ENST00000620219 RAB38P57729 211 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms