RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 BBS4Q96RK4 519 aa20.48■□□□□ 0.87
LINC00565-201ENST00000562710 TMEM246Q9BRR3 403 aa20.48■□□□□ 0.87
LINC00565-201ENST00000562710 ARHGAP9Q9BRR9 750 aa20.48■□□□□ 0.87
LINC00565-201ENST00000562710 A0A0B4J293 547 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 EDDM13A0A1B0GTR0 161 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 ANKRD34BA5PLL1 514 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 GLOD5A6NK44 160 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 CENPBD1B2RD01 187 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 NTSP30990 170 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 PRMT2P55345 433 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 CAV3P56539 151 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 TAS2R38P59533 333 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 MADCAM1Q13477 382 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 CD200R1LQ6Q8B3 271 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 SHFQ7M4L6 423 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 LINC01555Q8NAE3 123 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 GNPDA2Q8TDQ7 276 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 RNF31Q96EP0 1072 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 FYTTD1Q96QD9 318 aaKnown RBP20.47■□□□□ 0.87
LINC00565-201ENST00000562710 PRR14Q9BWN1 585 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 PINK1Q9BXM7 581 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 AICDAQ9GZX7 198 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 PAQR5Q9NXK6 330 aaPredicted RBP20.47■□□□□ 0.87
LINC00565-201ENST00000562710 GOLGA4Q13439 2230 aaKnown RBP20.47■□□□□ 0.87
LINC00565-201ENST00000562710 A0A0G2JPF8 293 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 HNRNPCL2B2RXH8 293 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 HNRNPCL3B7ZW38 293 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 MAN2B1O00754 1011 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 CLEC3AO75596 197 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 UBXN7O94888 489 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 HMGN2P05204 90 aaKnown RBP20.47■□□□□ 0.87
LINC00565-201ENST00000562710 HNRNPCL4P0DMR1 293 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 CD79BP40259 229 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 GNA13Q14344 377 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 TYW3Q6IPR3 259 aaKnown RBP20.47■□□□□ 0.87
LINC00565-201ENST00000562710 PRICKLE2Q7Z3G6 844 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 ADCK2Q7Z695 626 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 UBE2J2Q8N2K1 259 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 SIMC1Q8NDZ2 872 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 CXorf40AQ8TE69 158 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 SLC38A2Q96QD8 506 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 FAIM2Q9BWQ8 316 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 QRSL1Q9H0R6 528 aaKnown RBP20.47■□□□□ 0.87
LINC00565-201ENST00000562710 NDRG2Q9UN36 371 aaKnown RBP20.47■□□□□ 0.87
LINC00565-201ENST00000562710 IRAK3Q9Y616 596 aa20.47■□□□□ 0.87
LINC00565-201ENST00000562710 LRIT2A6NDA9 550 aa20.46■□□□□ 0.87
LINC00565-201ENST00000562710 KDM4EB2RXH2 506 aaPredicted RBP20.46■□□□□ 0.87
LINC00565-201ENST00000562710 ANXA11P50995 505 aaKnown RBP20.46■□□□□ 0.87
LINC00565-201ENST00000562710 TAS2R41P59536 307 aa20.46■□□□□ 0.87
LINC00565-201ENST00000562710 PPP3R1P63098 170 aa20.46■□□□□ 0.87
LINC00565-201ENST00000562710 HOXC5Q00444 222 aa20.46■□□□□ 0.87
LINC00565-201ENST00000562710 ADAMTSL4Q6UY14 1074 aa20.46■□□□□ 0.87
LINC00565-201ENST00000562710 TMEM64Q6YI46 380 aa20.46■□□□□ 0.87
LINC00565-201ENST00000562710 NOXA1Q86UR1 476 aa20.46■□□□□ 0.87
LINC00565-201ENST00000562710 ZFP41Q8N8Y5 198 aa20.46■□□□□ 0.87
LINC00565-201ENST00000562710 ZNF485Q8NCK3 441 aa20.46■□□□□ 0.87
LINC00565-201ENST00000562710 ZNF296Q8WUU4 475 aaPredicted RBP20.46■□□□□ 0.87
LINC00565-201ENST00000562710 COMMD3Q9UBI1 195 aa20.46■□□□□ 0.87
LINC00565-201ENST00000562710 MKI67P46013 3256 aaKnown RBP20.46■□□□□ 0.87
LINC00565-201ENST00000562710 PTPRSQ13332 1948 aa20.46■□□□□ 0.87
LINC00565-201ENST00000562710 FAM170BA6NMN3 283 aa20.45■□□□□ 0.87
LINC00565-201ENST00000562710 ERAL1O75616 437 aaKnown RBP20.45■□□□□ 0.87
LINC00565-201ENST00000562710 ALPPL2P10696 532 aa20.45■□□□□ 0.87
LINC00565-201ENST00000562710 ITGB8P26012 769 aa20.45■□□□□ 0.87
LINC00565-201ENST00000562710 MLLT3P42568 568 aaPredicted RBP20.45■□□□□ 0.87
LINC00565-201ENST00000562710 MAP4K2Q12851 820 aa20.45■□□□□ 0.87
LINC00565-201ENST00000562710 TSPAN31Q12999 210 aa20.45■□□□□ 0.87
LINC00565-201ENST00000562710 LCN1P1Q5VSP4 162 aa20.45■□□□□ 0.87
LINC00565-201ENST00000562710 C11orf74Q86VG3 221 aa20.45■□□□□ 0.87
LINC00565-201ENST00000562710 ENKURQ8TC29 256 aa20.45■□□□□ 0.87
LINC00565-201ENST00000562710 LGR4Q9BXB1 951 aa20.45■□□□□ 0.87
LINC00565-201ENST00000562710 RNF208Q9H0X6 261 aa20.45■□□□□ 0.87
LINC00565-201ENST00000562710 PLSCR3Q9NRY6 295 aa20.45■□□□□ 0.87
LINC00565-201ENST00000562710 CNIH4Q9P003 139 aa20.45■□□□□ 0.87
LINC00565-201ENST00000562710 MYO7AQ13402 2215 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 IGKV1-8A0A0C4DH67 115 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 TRDV1A0A1B0GX56 115 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 CASKO14936 926 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 ACRP10323 421 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 APEX1P27695 318 aaKnown RBP20.45■□□□□ 0.86
LINC00565-201ENST00000562710 IFNGR2P38484 337 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 ARHGEF6Q15052 776 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 BHLHB9Q6PI77 547 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 GRASPQ7Z6J2 395 aaPredicted RBP20.45■□□□□ 0.86
LINC00565-201ENST00000562710 LHFPL3Q86UP9 236 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 MRPL43Q8N983 215 aaKnown RBP20.45■□□□□ 0.86
LINC00565-201ENST00000562710 CAMK1GQ96NX5 476 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 NDEL1Q9GZM8 345 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 KLHL31Q9H511 634 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 WDR70Q9NW82 654 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 KCNE3Q9Y6H6 103 aa20.45■□□□□ 0.86
LINC00565-201ENST00000562710 FKTNO75072 461 aa20.44■□□□□ 0.86
LINC00565-201ENST00000562710 ADH1CP00326 375 aa20.44■□□□□ 0.86
LINC00565-201ENST00000562710 YES1P07947 543 aa20.44■□□□□ 0.86
LINC00565-201ENST00000562710 CEBPBP17676 345 aa20.44■□□□□ 0.86
LINC00565-201ENST00000562710 SOX18P35713 384 aa20.44■□□□□ 0.86
LINC00565-201ENST00000562710 MNX1P50219 401 aaPredicted RBP20.44■□□□□ 0.86
LINC00565-201ENST00000562710 CLCNKAP51800 687 aa20.44■□□□□ 0.86
LINC00565-201ENST00000562710 QPRTQ15274 297 aa20.44■□□□□ 0.86
LINC00565-201ENST00000562710 DEFB115Q30KQ5 88 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms