RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 NOXRED1Q6NXP6 359 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 RNF165Q6ZSG1 346 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 LHFPL3Q86UP9 236 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 NLGN1Q8N2Q7 840 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 ZNF582Q96NG8 517 aaPredicted RBP20.06■□□□□ 0.8
SDF4-206ENST00000478938 NTMT1Q9BV86 223 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 SEMA3GQ9NS98 782 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 ACSL6Q9UKU0 697 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 CA5BQ9Y2D0 317 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 TIMM13Q9Y5L4 95 aaPredicted RBP20.06■□□□□ 0.8
SDF4-206ENST00000478938 SMIM28A0A1B0GU29 152 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 HTR3BO95264 441 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 SYN1P17600 705 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 GAS1P54826 345 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 ILKQ13418 452 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 ZNF852Q6ZMS4 543 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 GLYATL2Q8WU03 294 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 ZNF285Q96NJ3 590 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 RLFQ13129 1914 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 PRR23D1E9PI22 279 aaPredicted RBP20.05■□□□□ 0.8
SDF4-206ENST00000478938 SEMA7AO75326 666 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 PEX14O75381 377 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 SPDEFO95238 335 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 CLDN9O95484 217 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 MMP10P09238 476 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 PRR23D2P0DMB1 279 aaPredicted RBP20.05■□□□□ 0.8
SDF4-206ENST00000478938 CBSLP0DN79 551 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 GJA1P17302 382 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 PRPS1L1P21108 318 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 CBSP35520 551 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 PGFP49763 221 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 VEGFCP49767 419 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 RGS4P49798 205 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 TAP2Q03519 686 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 SV2CQ496J9 727 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 ZNF660Q6AZW8 331 aaPredicted RBP20.05■□□□□ 0.8
SDF4-206ENST00000478938 GSG1LQ6UXU4 331 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 NHLRC1Q6VVB1 395 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 LRRTM3Q86VH5 581 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 PUSL1Q8N0Z8 303 aaKnown RBP20.05■□□□□ 0.8
SDF4-206ENST00000478938 GEMIN6Q8WXD5 167 aaKnown RBP20.05■□□□□ 0.8
SDF4-206ENST00000478938 TEX10Q9NXF1 929 aaPredicted RBP20.05■□□□□ 0.8
SDF4-206ENST00000478938 ENPP4Q9Y6X5 453 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 TMEM129A0AVI4 362 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 C1orf226A1L170 272 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 AGAP14A8MT82 685 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 FFAR1O14842 300 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 SCAMP1O15126 338 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 IGLV3-25P01717 112 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 DCAF4L1Q3SXM0 396 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 ELP2Q6IA86 826 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 BOLLQ8N9W6 283 aaKnown RBP20.05■□□□□ 0.8
SDF4-206ENST00000478938 ZFP3Q96NJ6 502 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 ARHGAP9Q9BRR9 750 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 ACTR6Q9GZN1 396 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 TAS2R3Q9NYW6 316 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 ZSWIM8A7E2V4 1837 aa20.05■□□□□ 0.8
SDF4-206ENST00000478938 OR6C68A6NDL8 312 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 S100A9P06702 114 aaKnown RBP20.04■□□□□ 0.8
SDF4-206ENST00000478938 RNF224P0DH78 156 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 PPP3CBP16298 524 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 HOXA11P31270 313 aaPredicted RBP20.04■□□□□ 0.8
SDF4-206ENST00000478938 KCNA10Q16322 511 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 SLC5A12Q1EHB4 618 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 SLC6A19Q695T7 634 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 SFRP4Q6FHJ7 346 aaPredicted RBP20.04■□□□□ 0.8
SDF4-206ENST00000478938 IL17RCQ8NAC3 791 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 PXT1Q8NFP0 134 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 RNFT2Q96EX2 444 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 CCDC88CQ9P219 2028 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 GALR3O60755 368 aaPredicted RBP20.04■□□□□ 0.8
SDF4-206ENST00000478938 ADAP00813 363 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 HLA-DPB1P04440 258 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 LIMS3P0CW19 117 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 LIMS4P0CW20 117 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 AMD1P17707 334 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 OPRD1P41143 372 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 TTPAP49638 278 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 RAG2P55895 527 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 SEC61A1P61619 476 aaKnown RBP20.04■□□□□ 0.8
SDF4-206ENST00000478938 SRSF11Q05519 484 aaKnown RBP20.04■□□□□ 0.8
SDF4-206ENST00000478938 SCARB2Q14108 478 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 MICBQ29980 383 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 ZNF613Q6PF04 617 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 TEX26Q8N6G2 289 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 ACOT12Q8WYK0 555 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 CMTM7Q96FZ5 175 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 PAPOLGQ9BWT3 736 aaKnown RBP20.04■□□□□ 0.8
SDF4-206ENST00000478938 DDX31Q9H8H2 851 aaKnown RBP20.04■□□□□ 0.8
SDF4-206ENST00000478938 C14orf105Q9NVL8 296 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 FAM120CQ9NX05 1096 aaKnown RBP20.04■□□□□ 0.8
SDF4-206ENST00000478938 MRPL15Q9P015 296 aaKnown RBP20.04■□□□□ 0.8
SDF4-206ENST00000478938 EPHA6Q9UF33 1036 aa20.04■□□□□ 0.8
SDF4-206ENST00000478938 DISC1C4P0D8 188 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 OR10H3O60404 316 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 CRYBA1P05813 215 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 EPORP19235 508 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 PTGFRP43088 359 aa20.03■□□□□ 0.8
SDF4-206ENST00000478938 SNRPEP62304 92 aaKnown RBP20.03■□□□□ 0.8
SDF4-206ENST00000478938 PYHIN1Q6K0P9 492 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms