RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 PLCXD2Q0VAA5 305 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 CBLBQ13191 982 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 SLMAPQ14BN4 828 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 ACKR1Q16570 336 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 CPSF6Q16630 551 aaKnown RBP eCLIP12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 C20orf204Q6ZNR8 217 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 GRAMD2AQ8IUY3 354 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 TRIM42Q8IWZ5 723 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 SPATA3Q8NHX4 192 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 PERPQ96FX8 193 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 ATOH8Q96SQ7 321 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 NXF5Q9H1B4 397 aaKnown RBP12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 UBTD1Q9HAC8 227 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 TAS2R10Q9NYW0 307 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 C6orf203Q9P0P8 240 aaPredicted RBP12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 CLCF1Q9UBD9 225 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 EXO1Q9UQ84 846 aaKnown RBP12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 RTTNQ86VV8 2226 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 MXRA5Q9NR99 2828 aa12.89□□□□□ -0.35
CHMP1A-210ENST00000551981 A0A1W2PS29 197 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 PRAMEF25A6NGN4 478 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 FOXE1O00358 373 aaPredicted RBP12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 TP73O15350 636 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 SMNDC1O75940 238 aaKnown RBP eCLIP12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 SEMA3DO95025 777 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 GBAP04062 536 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 CRHP06850 196 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 LTA4HP09960 611 aaKnown RBP12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 PORP16435 677 aaPredicted RBP12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 MC3RP41968 323 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 NNATQ16517 81 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 GRTP1Q5TC63 336 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 OR2A2Q6IF42 318 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 CXXC5Q7LFL8 322 aaKnown RBP12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 P4HA3Q7Z4N8 544 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 CTAGE3PQ8IX95 158 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 RDH11Q8TC12 318 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 HGDQ93099 445 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 OMA1Q96E52 524 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 PIK3IP1Q96FE7 263 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 LCORQ96JN0 433 aaPredicted RBP12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 FAM111AQ96PZ2 611 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 SERPINI1Q99574 410 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 MED18Q9BUE0 208 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 GALNT9Q9HCQ5 603 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 KLHL28Q9NXS3 571 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 BCAP29Q9UHQ4 241 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 DLGAP4Q9Y2H0 992 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 DSCAMO60469 2012 aa12.88□□□□□ -0.35
CHMP1A-210ENST00000551981 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 A0A1W2PNV4 684 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 TCRBV9S1A1TA0A576 114 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 C2orf72A6NCS6 295 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 TRIM64A6NGJ6 449 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 TRIM64BA6NI03 449 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 GOLGA6L10A6NI86 522 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 FAM159BA6NKW6 160 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 DEFB108AA8MXU0 73 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 INAFM1C9JVW0 142 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 PLOD2O00469 737 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 ZSCAN12O43309 604 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 TNFSF13O75888 250 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 GFAPP14136 432 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 CNTFP26441 200 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 CD79BP40259 229 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 PIK3CGP48736 1102 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 GFRA1P56159 465 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 DLG1Q12959 904 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 PLXDC2Q6UX71 529 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 CYS1Q717R9 158 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 CHMP1BQ7LBR1 199 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 PAGE2Q7Z2X7 111 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 CMC1Q7Z7K0 106 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 PLCZ1Q86YW0 608 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 RHEBL1Q8TAI7 183 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 TMCO6Q96DC7 493 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 SFXN2Q96NB2 322 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 WFIKKN1Q96NZ8 548 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 NODALQ96S42 347 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 G6PC3Q9BUM1 346 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 ITPAQ9BY32 194 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 BRINP2Q9C0B6 783 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 SAYSD1Q9NPB0 183 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 AHSPQ9NZD4 102 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 DTX4Q9Y2E6 619 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 SNX24Q9Y343 169 aa12.87□□□□□ -0.35
CHMP1A-210ENST00000551981 FBN1P35555 2871 aaKnown RBP12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 CCDC189A1A4V9 331 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 CCDC188H7C350 402 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 EIF3HO15372 352 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 GUCY1B2O75343 617 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 GSTA2P09210 222 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 S1PR1P21453 382 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 CRYGSP22914 178 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 SRD5A2P31213 254 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 DEKP35659 375 aaKnown RBP12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 GMPRP36959 345 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 ARL1P40616 181 aaPredicted RBP12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 PTGDSP41222 190 aa12.86□□□□□ -0.35
CHMP1A-210ENST00000551981 STARP49675 285 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms