RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 AP4B1Q9Y6B7 739 aa5.67□□□□□ -1.5
SMC5-202ENST00000471372 SPACA6W5XKT8 324 aa5.67□□□□□ -1.5
SMC5-202ENST00000471372 AFF2P51816 1311 aa5.67□□□□□ -1.5
SMC5-202ENST00000471372 ZNF724A8MTY0 619 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 CLDN5O00501 218 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 ZSCAN12O43309 604 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 ANP32DO95626 131 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 OAS1P00973 400 aaKnown RBP5.66□□□□□ -1.5
SMC5-202ENST00000471372 TOP1P11387 765 aaKnown RBP5.66□□□□□ -1.5
SMC5-202ENST00000471372 UQCRBP14927 111 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 OPRL1P41146 370 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 PPT1P50897 306 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 RPS27AP62979 156 aaKnown RBP5.66□□□□□ -1.5
SMC5-202ENST00000471372 CCNA1P78396 465 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 HYAL1Q12794 435 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 FAM189A2Q15884 450 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 TATDN3Q17R31 274 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 CFAP221Q4G0U5 840 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 PNCKQ6P2M8 343 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 LUZP1Q86V48 1076 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 TBC1D10CQ8IV04 446 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 LSMEM2Q8N112 164 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 FBXO32Q969P5 355 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 ZBTB9Q96C00 473 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 DHTKD1Q96HY7 919 aaPredicted RBP5.66□□□□□ -1.5
SMC5-202ENST00000471372 TCEANC2Q96MN5 208 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 CPXM1Q96SM3 734 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 MMP28Q9H239 520 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 RHOJQ9H4E5 214 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 ELOVL3Q9HB03 270 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 C2orf42Q9NWW7 574 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 GHRLQ9UBU3 117 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 PTBP2Q9UKA9 531 aaKnown RBP5.66□□□□□ -1.5
SMC5-202ENST00000471372 PPP1R3CQ9UQK1 317 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 NIP7Q9Y221 180 aaKnown RBP eCLIP5.66□□□□□ -1.5
SMC5-202ENST00000471372 MRPS18CQ9Y3D5 142 aaKnown RBP5.66□□□□□ -1.5
SMC5-202ENST00000471372 CARMIL1Q5VZK9 1371 aa5.66□□□□□ -1.5
SMC5-202ENST00000471372 SYNJ2O15056 1496 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 A0A087WW49 117 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 FAM172BPA6NC97 362 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 FBLL1A6NHQ2 334 aaKnown RBP5.65□□□□□ -1.5
SMC5-202ENST00000471372 SGK1O00141 431 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 TNFSF12O43508 249 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 RANBP6O60518 1105 aaKnown RBP5.65□□□□□ -1.5
SMC5-202ENST00000471372 DUSP11O75319 330 aaKnown RBP5.65□□□□□ -1.5
SMC5-202ENST00000471372 TOXO94900 526 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 CLDN1O95832 211 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 ECDO95905 644 aaPredicted RBP5.65□□□□□ -1.5
SMC5-202ENST00000471372 DHODHQ02127 395 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 CUL2Q13617 745 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 PDK3Q15120 406 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 CCDC6Q16204 474 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 ZNF672Q499Z4 452 aaPredicted RBP5.65□□□□□ -1.5
SMC5-202ENST00000471372 FILIP1LQ4L180 1135 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 BEND6Q5SZJ8 279 aaPredicted RBP5.65□□□□□ -1.5
SMC5-202ENST00000471372 TPGS2Q68CL5 300 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 Q6ZSR9 355 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 APLFQ8IW19 511 aaPredicted RBP5.65□□□□□ -1.5
SMC5-202ENST00000471372 ANKFN1Q8N957 763 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 OR1K1Q8NGR3 316 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 SPRYD4Q8WW59 207 aaPredicted RBP5.65□□□□□ -1.5
SMC5-202ENST00000471372 CNRIP1Q96F85 164 aaPredicted RBP5.65□□□□□ -1.5
SMC5-202ENST00000471372 SLC41A3Q96GZ6 507 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 MAGT1Q9H0U3 335 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 MTHFD2LQ9H903 347 aaPredicted RBP5.65□□□□□ -1.5
SMC5-202ENST00000471372 GPN2Q9H9Y4 310 aaPredicted RBP5.65□□□□□ -1.5
SMC5-202ENST00000471372 NMUR1Q9HB89 426 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 IL1RAPQ9NPH3 570 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 NLGN3Q9NZ94 848 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 MBD2Q9UBB5 411 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 PURGQ9UJV8 347 aaKnown RBP5.65□□□□□ -1.5
SMC5-202ENST00000471372 ICAM5Q9UMF0 924 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 CSNK1G3Q9Y6M4 447 aa5.65□□□□□ -1.5
SMC5-202ENST00000471372 CCDC7Q96M83 1385 aa5.65□□□□□ -1.51
SMC5-202ENST00000471372 LOC105371242A0A075B767 164 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 A0A0A6YYD4 124 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 A0A0J9YVX5 310 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 PMS2P5A8MQ11 134 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 G3V2L1 256 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 INPP4BO15327 924 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 ZNF208O43345 1280 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 KLHL41O60662 606 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 CEACAM4O75871 244 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 SFTPCP11686 197 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 NT5EP21589 574 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 PCMT1P22061 227 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 PGFP49763 221 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 FOXG1P55316 489 aaPredicted RBP5.64□□□□□ -1.51
SMC5-202ENST00000471372 ZRSR1Q15695 479 aaKnown RBP5.64□□□□□ -1.51
SMC5-202ENST00000471372 MAPK6Q16659 721 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 ZNF718Q3SXZ3 478 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 UNC50Q53HI1 259 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 LEG1Q6P5S2 330 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 SYT10Q6XYQ8 523 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 Q6ZRP5 223 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 PARGQ86W56 976 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 SLC22A9Q8IVM8 553 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 UBQLNLQ8IYU4 475 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 BHLHE23Q8NDY6 225 aa5.64□□□□□ -1.51
SMC5-202ENST00000471372 NANPQ8TBE9 248 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms