RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ZNF599Q96NL3 588 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 VPS35Q96QK1 796 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 CCM2Q9BSQ5 444 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 DUSP26Q9BV47 211 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 ADI1Q9BV57 179 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 TDRD1Q9BXT4 1180 aaKnown RBP4.35□□□□□ -1.71
SDCBP-205ENST00000447267 BEX1Q9HBH7 125 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 SACM1LQ9NTJ5 587 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 CBLN4Q9NTU7 201 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 TMEM140Q9NV12 185 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 EXOC1Q9NV70 894 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 TBCCD1Q9NVR7 557 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 AIPL1Q9NZN9 384 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 HEY2Q9UBP5 337 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 ZNF223Q9UK11 482 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-205ENST00000447267 GPR45Q9Y5Y3 372 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 DNAH7Q8WXX0 4024 aa4.35□□□□□ -1.71
SDCBP-205ENST00000447267 A0A0U1RQJ8 604 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 GOLGA6L10A6NI86 522 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 CGB1A6NKQ9 187 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 SHISA9B4DS77 424 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 GOLGA6L19H0YKK7 550 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 H3BQV1 296 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 NDUFS8O00217 210 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 IFRD1O00458 451 aaPredicted RBP4.34□□□□□ -1.71
SDCBP-205ENST00000447267 SGTAO43765 313 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 LIASO43766 372 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 P04436 131 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 FESP07332 822 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 MMP2P08253 660 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 DDCP20711 480 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 GDF1P27539 372 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 CASQ1P31415 396 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 CDH5P33151 784 aaPredicted RBP4.34□□□□□ -1.71
SDCBP-205ENST00000447267 TTKP33981 857 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 PNLIPRP1P54315 467 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 ELLP55199 621 aaPredicted RBP4.34□□□□□ -1.71
SDCBP-205ENST00000447267 CDH11P55287 796 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 MRPS35P82673 323 aaKnown RBP4.34□□□□□ -1.71
SDCBP-205ENST00000447267 PLOD1Q02809 727 aaPredicted RBP4.34□□□□□ -1.71
SDCBP-205ENST00000447267 PTP4A2Q12974 167 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 PTK6Q13882 451 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 KIR2DS3Q14952 304 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 SLC9A3R2Q15599 337 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 ERCC6LQ2NKX8 1250 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 C2orf68Q2NKX9 166 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 EIPR1Q53HC9 387 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 PRAMEF20Q5VT98 475 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 FAM173BQ6P4H8 233 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 SYT10Q6XYQ8 523 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 STAC2Q6ZMT1 411 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 R3HCC1LQ7Z5L2 792 aaKnown RBP4.34□□□□□ -1.71
SDCBP-205ENST00000447267 SLFN11Q7Z7L1 901 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 LRRC25Q8N386 305 aaPredicted RBP4.34□□□□□ -1.71
SDCBP-205ENST00000447267 LINC01555Q8NAE3 123 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 PLPP5Q8NEB5 264 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 ACTRT2Q8TDY3 377 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 FAM172AQ8WUF8 416 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 NRG4Q8WWG1 115 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 SLC9A6Q92581 669 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 UCN3Q969E3 161 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 ABTB1Q969K4 478 aaPredicted RBP4.34□□□□□ -1.71
SDCBP-205ENST00000447267 SLC25A28Q96A46 364 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 TADA1Q96BN2 335 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 PTCD3Q96EY7 689 aaKnown RBP4.34□□□□□ -1.71
SDCBP-205ENST00000447267 ZNF845Q96IR2 970 aaPredicted RBP4.34□□□□□ -1.71
SDCBP-205ENST00000447267 ZFP3Q96NJ6 502 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 IL17FQ96PD4 163 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 ACTR6Q9GZN1 396 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 PLAC1Q9HBJ0 212 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 PCDH9Q9HC56 1237 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 FAIMQ9NVQ4 179 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 ETAA1Q9NY74 926 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 OR6C2Q9NZP2 312 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 RUVBL2Q9Y230 463 aaKnown RBP4.34□□□□□ -1.71
SDCBP-205ENST00000447267 YARS2Q9Y2Z4 477 aaKnown RBP4.34□□□□□ -1.71
SDCBP-205ENST00000447267 GRIP1Q9Y3R0 1128 aa4.34□□□□□ -1.71
SDCBP-205ENST00000447267 NCKAP5O14513 1909 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 LOC390937A0A1W2PQ73 354 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 C5orf63A6NC05 138 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 C2CD4BA6NLJ0 364 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 B4DSR2 109 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 ANKRD66B4E2M5 251 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 E7EQL1 145 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 H7C417 338 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 GFYI3L273 518 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 POLR2DO15514 142 aaKnown RBP4.33□□□□□ -1.72
SDCBP-205ENST00000447267 PPP3CBP16298 524 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 MSH3P20585 1137 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 MSNP26038 577 aaKnown RBP4.33□□□□□ -1.72
SDCBP-205ENST00000447267 PSMB5P28074 263 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 AKT1P31749 480 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 USP8P40818 1118 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 MMP13P45452 471 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 NAGLUP54802 743 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 RAG2P55895 527 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 SNX16P57768 344 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 TPI1P60174 286 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 MXRA7P84157 204 aa4.33□□□□□ -1.72
SDCBP-205ENST00000447267 NIPAL4Q0D2K0 466 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms