RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 STRAPQ9Y3F4 350 aaKnown RBP3.72□□□□□ -1.81
NF1-220ENST00000581113 CHTOPQ9Y3Y2 248 aaKnown RBP3.72□□□□□ -1.81
NF1-220ENST00000581113 C5orf51A6NDU8 294 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 SLC1A7O00341 560 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 IDH3BO43837 385 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 FCGR3BO75015 233 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 IDH1O75874 414 aaKnown RBP3.71□□□□□ -1.82
NF1-220ENST00000581113 AK1P00568 194 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 YES1P07947 543 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 SSTR1P30872 391 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 EPS15P42566 896 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 CDX1P47902 265 aaPredicted RBP3.71□□□□□ -1.82
NF1-220ENST00000581113 KIAA1024LP59773 190 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 PTENP60484 403 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 IL10RBQ08334 325 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 IL24Q13007 206 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 SYCP1Q15431 976 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 SGCBQ16585 318 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 HADHQ16836 314 aaKnown RBP3.71□□□□□ -1.82
NF1-220ENST00000581113 C2CD6Q53TS8 623 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 BTNL8Q6UX41 500 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 METTL7BQ6UX53 244 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 MSANTD1Q6ZTZ1 278 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 MIER3Q7Z3K6 550 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 ZNF321PQ8N8H1 164 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 UXS1Q8NBZ7 420 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 LPCAT1Q8NF37 534 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 SAMD8Q96LT4 415 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 NEDD4LQ96PU5 975 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 ATOH8Q96SQ7 321 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 PKP2Q99959 881 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 RBM4BQ9BQ04 359 aaKnown RBP3.71□□□□□ -1.82
NF1-220ENST00000581113 DDX50Q9BQ39 737 aaKnown RBP3.71□□□□□ -1.82
NF1-220ENST00000581113 MLPHQ9BV36 600 aaPredicted RBP3.71□□□□□ -1.82
NF1-220ENST00000581113 OSBPL8Q9BZF1 889 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 DNAJC11Q9NVH1 559 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 PAK5Q9P286 719 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 PILRBQ9UKJ0 227 aa3.71□□□□□ -1.82
NF1-220ENST00000581113 COL4A5P29400 1685 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 DICER1Q9UPY3 1922 aaKnown RBP3.7□□□□□ -1.82
NF1-220ENST00000581113 CNTNAP1P78357 1384 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 NUP98P52948 1817 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 GOLGA6L7A0A1B0GV03 622 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 XKRY2A2RUG3 117 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 MPTX1A8MV57 137 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 TMEM150CB9EJG8 249 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 PRSS46E5RG02 174 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 E5RGE8 158 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 H3BMM5 538 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 SLC33A1O00400 549 aaPredicted RBP3.7□□□□□ -1.82
NF1-220ENST00000581113 CXCL11O14625 94 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 SURF4O15260 269 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 FLRT2O43155 660 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 CRLF1O75462 422 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 FLOT1O75955 427 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 MT-ATP6P00846 226 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 C9P02748 559 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 KRT5P13647 590 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 CD59P13987 128 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 CASTP20810 708 aaKnown RBP3.7□□□□□ -1.82
NF1-220ENST00000581113 GLRA2P23416 452 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 PSMB4P28070 264 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 PDHA2P29803 388 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 SFNP31947 248 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 CTNNB1P35222 781 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 RDXP35241 583 aaKnown RBP3.7□□□□□ -1.82
NF1-220ENST00000581113 TMEM50BP56557 158 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 CLDN17P56750 224 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 ASIC1P78348 528 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 IRX4P78413 519 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 CALCOCO2Q13137 446 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 SRSF9Q13242 221 aaKnown RBP eCLIP3.7□□□□□ -1.82
NF1-220ENST00000581113 GPM6BQ13491 265 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 STK11Q15831 433 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 FAM189A2Q15884 450 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 FILIP1LQ4L180 1135 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 AARDQ4LEZ3 155 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 PRSS55Q6UWB4 352 aaPredicted RBP3.7□□□□□ -1.82
NF1-220ENST00000581113 FRRS1Q6ZNA5 592 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 USP50Q70EL3 339 aaPredicted RBP3.7□□□□□ -1.82
NF1-220ENST00000581113 TAF8Q7Z7C8 310 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 GTSCR1Q86UQ5 136 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 AMZ2Q86W34 360 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 SERPINA12Q8IW75 414 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 ZCCHC7Q8N3Z6 543 aaKnown RBP3.7□□□□□ -1.82
NF1-220ENST00000581113 AQP11Q8NBQ7 271 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 RNASE8Q8TDE3 154 aaKnown RBP3.7□□□□□ -1.82
NF1-220ENST00000581113 ATP8B4Q8TF62 1192 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 NXPE2Q96DL1 559 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 CNRIP1Q96F85 164 aaPredicted RBP3.7□□□□□ -1.82
NF1-220ENST00000581113 TTC25Q96NG3 672 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 PARK7Q99497 189 aaKnown RBP3.7□□□□□ -1.82
NF1-220ENST00000581113 HNRNPABQ99729 332 aaKnown RBP3.7□□□□□ -1.82
NF1-220ENST00000581113 UBXN6Q9BZV1 441 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 CARD9Q9H257 536 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 LMAN1LQ9HAT1 526 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 BAIAP2L1Q9UHR4 511 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 MAD2L2Q9UI95 211 aa3.7□□□□□ -1.82
NF1-220ENST00000581113 LNPEPQ9UIQ6 1025 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms