RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 NT5EP21589 574 aa20.63■□□□□ 0.89
CDKN3-207ENST00000543789 PTPN6P29350 595 aa20.63■□□□□ 0.89
CDKN3-207ENST00000543789 HOXC12P31275 282 aa20.63■□□□□ 0.89
CDKN3-207ENST00000543789 LTBQ06643 244 aa20.63■□□□□ 0.89
CDKN3-207ENST00000543789 PCBP2Q15366 365 aaKnown RBP eCLIP20.63■□□□□ 0.89
CDKN3-207ENST00000543789 C6orf163Q5TEZ5 329 aa20.63■□□□□ 0.89
CDKN3-207ENST00000543789 YRDCQ86U90 279 aaKnown RBP20.63■□□□□ 0.89
CDKN3-207ENST00000543789 CENPLQ8N0S6 344 aaPredicted RBP20.63■□□□□ 0.89
CDKN3-207ENST00000543789 C9orf106Q8NAJ2 232 aa20.63■□□□□ 0.89
CDKN3-207ENST00000543789 FAM83FQ8NEG4 500 aaPredicted RBP20.63■□□□□ 0.89
CDKN3-207ENST00000543789 DACH2Q96NX9 599 aa20.63■□□□□ 0.89
CDKN3-207ENST00000543789 SERPINI1Q99574 410 aa20.63■□□□□ 0.89
CDKN3-207ENST00000543789 KCNF1Q9H3M0 494 aa20.63■□□□□ 0.89
CDKN3-207ENST00000543789 TNPO3Q9Y5L0 923 aaKnown RBP20.63■□□□□ 0.89
CDKN3-207ENST00000543789 NINQ8N4C6 2090 aa20.63■□□□□ 0.89
CDKN3-207ENST00000543789 ERN1O75460 977 aaKnown RBP20.62■□□□□ 0.89
CDKN3-207ENST00000543789 SEMA3DO95025 777 aa20.62■□□□□ 0.89
CDKN3-207ENST00000543789 NAGAP17050 411 aa20.62■□□□□ 0.89
CDKN3-207ENST00000543789 STX2P32856 288 aa20.62■□□□□ 0.89
CDKN3-207ENST00000543789 GCKP35557 465 aa20.62■□□□□ 0.89
CDKN3-207ENST00000543789 PIK3CGP48736 1102 aa20.62■□□□□ 0.89
CDKN3-207ENST00000543789 ACAP2Q15057 778 aa20.62■□□□□ 0.89
CDKN3-207ENST00000543789 ANGPTL8Q6UXH0 198 aa20.62■□□□□ 0.89
CDKN3-207ENST00000543789 GOLGA7Q7Z5G4 137 aa20.62■□□□□ 0.89
CDKN3-207ENST00000543789 FBF1Q8TES7 1133 aa20.62■□□□□ 0.89
CDKN3-207ENST00000543789 C18orf12Q96KH6 178 aa20.62■□□□□ 0.89
CDKN3-207ENST00000543789 RBM24Q9BX46 236 aaKnown RBP20.62■□□□□ 0.89
CDKN3-207ENST00000543789 NXF5Q9H1B4 397 aaKnown RBP20.62■□□□□ 0.89
CDKN3-207ENST00000543789 GRHL1Q9NZI5 618 aa20.62■□□□□ 0.89
CDKN3-207ENST00000543789 PPM1BO75688 479 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 CLDN9O95484 217 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 HRGP04196 525 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 C2P06681 752 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 KLK1P06870 262 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 CPMP14384 443 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 CPN1P15169 458 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 PORP16435 677 aaPredicted RBP20.61■□□□□ 0.89
CDKN3-207ENST00000543789 S1PR1P21453 382 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 GPX3P22352 226 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 DCAF7P61962 342 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 IRF9Q00978 393 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 NAB1Q13506 487 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 SLC30A6Q6NXT4 461 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 TMEM81Q6P7N7 255 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 NUP54Q7Z3B4 507 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 ISL2Q96A47 359 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 SMR3AQ99954 134 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 SFXN3Q9BWM7 321 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 AHSPQ9NZD4 102 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 CFL2Q9Y281 166 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 NCKAP5O14513 1909 aa20.61■□□□□ 0.89
CDKN3-207ENST00000543789 CD53P19397 219 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 MAGEA4P43358 317 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 SLCO1A2P46721 670 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 PLTPP55058 493 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 FOXF2Q12947 444 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 POU4F3Q15319 338 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 MROH9Q5TGP6 573 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 METTL2BQ6P1Q9 378 aaKnown RBP20.6■□□□□ 0.89
CDKN3-207ENST00000543789 Q71RC1 249 aaPredicted RBP20.6■□□□□ 0.89
CDKN3-207ENST00000543789 SLC44A1Q8WWI5 657 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 ATP6V1E2Q96A05 226 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 ZFP3Q96NJ6 502 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 TM9SF2Q99805 663 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 TUBA1CQ9BQE3 449 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 BEX4Q9NWD9 120 aaPredicted RBP20.6■□□□□ 0.89
CDKN3-207ENST00000543789 ADAM29Q9UKF5 820 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 DTX4Q9Y2E6 619 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 VPS13CQ709C8 3753 aa20.6■□□□□ 0.89
CDKN3-207ENST00000543789 C2orf72A6NCS6 295 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 SNPHO15079 494 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 RAD51CO43502 376 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 ICOSLGO75144 302 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 RCBTB2O95199 551 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 SIX3O95343 332 aaPredicted RBP20.59■□□□□ 0.89
CDKN3-207ENST00000543789 INHBBP09529 407 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 ADSLP30566 484 aaPredicted RBP20.59■□□□□ 0.89
CDKN3-207ENST00000543789 SOX18P35713 384 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 ARL1P40616 181 aaPredicted RBP20.59■□□□□ 0.89
CDKN3-207ENST00000543789 CPA2P48052 419 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 SNTA1Q13424 505 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 CCNYL2Q5T2Q4 361 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 DESI1Q6ICB0 168 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 KLC3Q6P597 504 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 ENPP6Q6UWR7 440 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 LUZP2Q86TE4 346 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 CCDC25Q86WR0 208 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 VWA5B2Q8N398 1253 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 HGDQ93099 445 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 CDK15Q96Q40 435 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 NODALQ96S42 347 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 NOL11Q9H8H0 719 aaKnown RBP20.59■□□□□ 0.89
CDKN3-207ENST00000543789 GALNT8Q9NY28 637 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 CPSF2Q9P2I0 782 aaKnown RBP20.59■□□□□ 0.89
CDKN3-207ENST00000543789 BCAP29Q9UHQ4 241 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 EXO1Q9UQ84 846 aaKnown RBP20.59■□□□□ 0.89
CDKN3-207ENST00000543789 ARHGAP21Q5T5U3 1957 aa20.59■□□□□ 0.89
CDKN3-207ENST00000543789 H0Y3Z8 333 aa20.58■□□□□ 0.89
CDKN3-207ENST00000543789 OR7A17O14581 309 aa20.58■□□□□ 0.89
CDKN3-207ENST00000543789 CASKO14936 926 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms