RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 CHMP24386 653 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 PTX3P26022 381 aaPredicted RBP9.13□□□□□ -0.95
MDC1-202ENST00000416571 ABCD3P28288 659 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 SLCO1A2P46721 670 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 FASTKD3Q14CZ7 662 aaKnown RBP9.13□□□□□ -0.95
MDC1-202ENST00000416571 SLC30A6Q6NXT4 461 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 PRSS57Q6UWY2 283 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 RAPH1Q70E73 1250 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 IFNEQ86WN2 208 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 GRAMD2AQ8IUY3 354 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 KLHL7Q8IXQ5 586 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 ZBED8Q8IZ13 594 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 CIARTQ8N365 385 aaPredicted RBP9.13□□□□□ -0.95
MDC1-202ENST00000416571 C17orf47Q8NEP4 570 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 SPATA3Q8NHX4 192 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 RDH11Q8TC12 318 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 SLC44A1Q8WWI5 657 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 WNT2BQ93097 391 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 DTNBP1Q96EV8 351 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 PERPQ96FX8 193 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 FAM111AQ96PZ2 611 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 OSBPL11Q9BXB4 747 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 OR10A5Q9H207 317 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 ALG9Q9H6U8 611 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 ACTR8Q9H981 624 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 UBTD1Q9HAC8 227 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 CXorf21Q9HAI6 301 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 C6orf203Q9P0P8 240 aaPredicted RBP9.13□□□□□ -0.95
MDC1-202ENST00000416571 FETUBQ9UGM5 382 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 MAPRE3Q9UPY8 281 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 COL6A5A8TX70 2615 aa9.13□□□□□ -0.95
MDC1-202ENST00000416571 A0A0A6YYD5 115 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 A8MXE2 369 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 INAFM1C9JVW0 142 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 SNPHO15079 494 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 TMPRSS11DO60235 418 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 EEDO75530 441 aaKnown RBP9.12□□□□□ -0.95
MDC1-202ENST00000416571 CBR3O75828 277 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 PIAS1O75925 651 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 SMNDC1O75940 238 aaKnown RBP eCLIP9.12□□□□□ -0.95
MDC1-202ENST00000416571 SEC31AO94979 1220 aaKnown RBP9.12□□□□□ -0.95
MDC1-202ENST00000416571 ABCB1P08183 1280 aaPredicted RBP9.12□□□□□ -0.95
MDC1-202ENST00000416571 RHOXF2BP0C7M4 288 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 NAGAP17050 411 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 NT5EP21589 574 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 RAB10P61026 200 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 FUT7Q11130 342 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 NNATQ16517 81 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 ACKR1Q16570 336 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 LIPJQ5W064 366 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 MRM1Q6IN84 353 aaKnown RBP9.12□□□□□ -0.95
MDC1-202ENST00000416571 CHMP1BQ7LBR1 199 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 CXXC5Q7LFL8 322 aaKnown RBP9.12□□□□□ -0.95
MDC1-202ENST00000416571 NUP54Q7Z3B4 507 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 P4HA3Q7Z4N8 544 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 TBC1D1Q86TI0 1168 aaPredicted RBP9.12□□□□□ -0.95
MDC1-202ENST00000416571 TRIM42Q8IWZ5 723 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 SLC35F6Q8N357 371 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 TEX9Q8N6V9 391 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 OR7G1Q8NGA0 311 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 OR4K14Q8NGD5 310 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 ADIPOR1Q96A54 375 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 PIK3IP1Q96FE7 263 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 GPR22Q99680 433 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 RBBP8Q99708 897 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 CPNE1Q99829 537 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 MCMBPQ9BTE3 642 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 MED18Q9BUE0 208 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 TRIM31Q9BZY9 425 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 DDX31Q9H8H2 851 aaKnown RBP9.12□□□□□ -0.95
MDC1-202ENST00000416571 SERHLQ9NQF3 203 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 KLHL28Q9NXS3 571 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 SNX12Q9UMY4 172 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 CFL2Q9Y281 166 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 TESMINQ9Y4I5 508 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 ASB4Q9Y574 426 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 HIVEP2P31629 2446 aa9.12□□□□□ -0.95
MDC1-202ENST00000416571 ARID1AO14497 2285 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 C2orf72A6NCS6 295 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 TRIM64A6NGJ6 449 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 TRIM64BA6NI03 449 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 E7ESA3 106 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 UBXN8O00124 270 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 MSTNO14793 375 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 CTIFO43310 598 aaKnown RBP9.11□□□□□ -0.95
MDC1-202ENST00000416571 KERAO60938 352 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 ICOSLGO75144 302 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 GBAP04062 536 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 CT62P0C5K7 136 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 GPX3P22352 226 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 BSGP35613 385 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 SOX18P35713 384 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 GP5P40197 560 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 ARL1P40616 181 aaPredicted RBP9.11□□□□□ -0.95
MDC1-202ENST00000416571 XKP51811 444 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 PLCXD2Q0VAA5 305 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 SNTA1Q13424 505 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 CUL3Q13618 768 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 SLMAPQ14BN4 828 aa9.11□□□□□ -0.95
MDC1-202ENST00000416571 ZKSCAN8Q15776 578 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms