RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 DCTN2Q13561 401 aaKnown RBP15.18■□□□□ 0.02
SNX6-202ENST00000396526 STX19Q8N4C7 294 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 SGCDQ92629 289 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 SMIM10Q96HG1 83 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 GPN2Q9H9Y4 310 aaPredicted RBP15.18■□□□□ 0.02
SNX6-202ENST00000396526 PILRAQ9UKJ1 303 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 CCDC88CQ9P219 2028 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 H3BN98 237 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 SYT5O00445 386 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 NME6O75414 186 aaPredicted RBP15.18■□□□□ 0.02
SNX6-202ENST00000396526 COX10Q12887 443 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 CASP12Q6UXS9 341 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 PTCHD4Q6ZW05 846 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 USP53Q70EK8 1073 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 C16orf58Q96GQ5 468 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 POLR2J3Q9H1A7 115 aaKnown RBP15.18■□□□□ 0.02
SNX6-202ENST00000396526 TCEAL2Q9H3H9 227 aaPredicted RBP15.18■□□□□ 0.02
SNX6-202ENST00000396526 GIN1Q9NXP7 522 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 SLC22A7Q9Y694 548 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 OR5K3A6NET4 321 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 SLITRK5O94991 958 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 LGI1O95970 557 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 GASTP01350 101 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 MT-ND2P03891 347 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 HTR1AP08908 422 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 OSMP13725 252 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 SIM1P81133 766 aaPredicted RBP15.18■□□□□ 0.02
SNX6-202ENST00000396526 GTF2IRD2BQ6EKJ0 949 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 GTF2IRD2Q86UP8 949 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 SLC38A4Q969I6 547 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 PCDHGA10Q9Y5H3 936 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 C5orf42Q9H799 3197 aa15.18■□□□□ 0.02
SNX6-202ENST00000396526 RANBP2P49792 3224 aaKnown RBP15.17■□□□□ 0.02
SNX6-202ENST00000396526 A0A1W2PPW3 197 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 B4DGG1 531 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 ATE1O95260 518 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 UBXN2BQ14CS0 331 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 PTGES3Q15185 160 aaKnown RBP15.17■□□□□ 0.02
SNX6-202ENST00000396526 MLIPQ5VWP3 458 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 GKN2Q86XP6 184 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 APOBEC4Q8WW27 367 aaKnown RBP15.17■□□□□ 0.02
SNX6-202ENST00000396526 SLC9A6Q92581 669 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 TANKQ92844 425 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 OTUB1Q96FW1 271 aaPredicted RBP15.17■□□□□ 0.02
SNX6-202ENST00000396526 SHDQ96IW2 340 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 FUNDC2Q9BWH2 189 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.17■□□□□ 0.02
SNX6-202ENST00000396526 KCMF1Q9P0J7 381 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 IFT52Q9Y366 437 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 KNL1Q8NG31 2342 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 SH3D21A4FU49 640 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 FADS2O95864 444 aaKnown RBP15.17■□□□□ 0.02
SNX6-202ENST00000396526 CHRM4P08173 479 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 PVRP15151 417 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 ELAVL4P26378 380 aaKnown RBP15.17■□□□□ 0.02
SNX6-202ENST00000396526 TARDBPQ13148 414 aaKnown RBP eCLIP15.17■□□□□ 0.02
SNX6-202ENST00000396526 MAPK11Q15759 364 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 SMN1Q16637 294 aaKnown RBP15.17■□□□□ 0.02
SNX6-202ENST00000396526 PEX5LQ8IYB4 626 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 ANKHQ9HCJ1 492 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 PAK1IP1Q9NWT1 392 aaPredicted RBP15.17■□□□□ 0.02
SNX6-202ENST00000396526 AASSQ9UDR5 926 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 MDC1Q14676 2089 aaKnown RBP15.17■□□□□ 0.02
SNX6-202ENST00000396526 NINQ8N4C6 2090 aa15.17■□□□□ 0.02
SNX6-202ENST00000396526 ARHGEF17Q96PE2 2063 aaPredicted RBP15.17■□□□□ 0.02
SNX6-202ENST00000396526 TRBV4-1A0A0J9YWV2 114 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 A0A1W2PRQ8 180 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 CLCA1A8K7I4 914 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 AP3D1O14617 1153 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 INMTO95050 263 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 CPMP14384 443 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 PTGER1P34995 402 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 TAS2R41P59536 307 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 RUNX2Q13950 521 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 DGCR6Q14129 220 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 LARS2Q15031 903 aaKnown RBP15.16■□□□□ 0.02
SNX6-202ENST00000396526 CDC73Q6P1J9 531 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 ANKRD13BQ86YJ7 626 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 FAR1Q8WVX9 515 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 PRRC1Q96M27 445 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 SEMA6CQ9H3T2 930 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 MTHFD2LQ9H903 347 aaPredicted RBP15.16■□□□□ 0.02
SNX6-202ENST00000396526 CA14Q9ULX7 337 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 PLXND1Q9Y4D7 1925 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 LOC105369274A0A096LPK9 316 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 LOC102723532A0A0G2JNH3 316 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 P2RX6O15547 441 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 CNOT3O75175 753 aaKnown RBP15.16■□□□□ 0.02
SNX6-202ENST00000396526 WBP4O75554 376 aaKnown RBP15.16■□□□□ 0.02
SNX6-202ENST00000396526 TYRP1P17643 537 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 PCMT1P22061 227 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 VSX2P58304 361 aaPredicted RBP15.16■□□□□ 0.02
SNX6-202ENST00000396526 NFATC3Q12968 1075 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 ILKQ13418 452 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 PIN1Q13526 163 aaPredicted RBP15.16■□□□□ 0.02
SNX6-202ENST00000396526 NIPAL1Q6NVV3 410 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 CHRDL2Q6WN34 429 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 Q6ZPB1 254 aaPredicted RBP15.16■□□□□ 0.02
SNX6-202ENST00000396526 RNF44Q7L0R7 432 aa15.16■□□□□ 0.02
SNX6-202ENST00000396526 OR4N4Q8N0Y3 316 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms