RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 LSM11P83369 360 aaKnown RBP eCLIP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 CBLBQ13191 982 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 GBX1Q14549 363 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 CCDC157Q569K6 752 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 ARMC6Q6NXE6 501 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.6□□□□□ -1.355e-11■■■■■ 42.7
TGFBR3-207ENST00000525962 DCAF4L2Q8NA75 395 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 OR5AR1Q8NGP9 310 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 OR8S1Q8NH09 359 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 OR8K5Q8NH50 307 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 C16orf78Q8WTQ4 265 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 PLD4Q96BZ4 506 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 ZBED6CLQ96FA7 236 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 MS4A4AQ96JQ5 239 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 MRPL9Q9BYD2 267 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 C3orf14Q9HBI5 128 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 PRDM9Q9NQV7 894 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 COMMD9Q9P000 198 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 SPACA6W5XKT8 324 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 COL4A5P29400 1685 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 MEIS3P1A6NDR6 274 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 DRGXA6NNA5 263 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 PPM1DO15297 605 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 NDUFS4O43181 175 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 LYRM1O43325 122 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 FMO6PO60774 539 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 AOC2O75106 756 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 ZNF623O75123 536 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 CDC123O75794 336 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 APOC3P02656 99 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 FBXO45P0C2W1 286 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 GNSP15586 552 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 SELPP16109 830 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 STAT5AP42229 794 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 HNRNPFP52597 415 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 ZNF385BQ569K4 471 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 ESPNLQ6ZVH7 1005 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 CEACAM19Q7Z692 300 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 NPAS4Q8IUM7 802 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 ALDH16A1Q8IZ83 802 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 KLHL36Q8N4N3 616 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 TEX26Q8N6G2 289 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 HORMAD2Q8N7B1 307 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 ZNF461Q8TAF7 563 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 CTRCQ99895 268 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 SGIP1Q9BQI5 828 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 OR10A4Q9H209 315 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 HMX1Q9NP08 348 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 NLGN3Q9NZ94 848 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 STOML2Q9UJZ1 356 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 STUB1Q9UNE7 303 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 NTNG1Q9Y2I2 539 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 MRPS23Q9Y3D9 190 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 ALG5Q9Y673 324 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 GLTPD2A6NH11 291 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 MANSC4A6NHS7 340 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 L7N2F9 121 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 EIF3FO00303 357 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 EOMESO95936 686 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 PAK4O96013 591 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 HLA-DPB1P04440 258 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 ITGAMP11215 1152 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 STOMP27105 288 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 ITPKBP27987 946 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 SOX18P35713 384 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 ADH7P40394 386 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 RPL34P49207 117 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 SPINT3P49223 89 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 PSMD4P55036 377 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 AP1S2P56377 157 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 ADAM15Q13444 863 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 SPIN4Q56A73 249 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 CCNJQ5T5M9 372 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 GATSQ8NAP1 163 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 OR4C6Q8NH72 309 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 SLC5A11Q8WWX8 675 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 RFKQ969G6 155 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 TRIM43Q96BQ3 446 aaPredicted RBP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 DUS3LQ96G46 650 aaKnown RBP6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 KLHL31Q9H511 634 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 MARK1Q9P0L2 795 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 LHX3Q9UBR4 397 aa6.6□□□□□ -1.35
TGFBR3-207ENST00000525962 PROM1O43490 865 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 CHST10O43529 356 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 PI15O43692 258 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 AKAP8O43823 692 aaKnown RBP6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 CACNG3O60359 315 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 TRIM3O75382 744 aaPredicted RBP6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 RAB36O95755 333 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 SRPRAP08240 638 aaKnown RBP6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 GKN3PP0CG01 181 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 SRCP12931 536 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 LHCGRP22888 699 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 MNDAP41218 407 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 MTNR1AP48039 350 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 CLDN12P56749 244 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 OR12D2P58182 307 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 RING1Q06587 406 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 NTRK2Q16620 822 aa6.59□□□□□ -1.35
TGFBR3-207ENST00000525962 ZNF630Q2M218 657 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms