RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 BPIFB6Q8NFQ5 453 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 SFXN5Q8TD22 340 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 ZG16BQ96DA0 208 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 ZSCAN32Q9NX65 697 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 SEC14L3Q9UDX4 400 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 POMT2Q9UKY4 750 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 GPC6Q9Y625 555 aaPredicted RBP12.05□□□□□ -0.48
VAPB-203ENST00000463370 SLC22A7Q9Y694 548 aa12.05□□□□□ -0.48
VAPB-203ENST00000463370 TRBV4-1A0A0J9YWV2 114 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 M0R3H8 397 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 TLR4O00206 839 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 SDC3O75056 442 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 LDB3O75112 727 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 UGT2B11O75310 529 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 NME1P15531 152 aaKnown RBP12.04□□□□□ -0.48
VAPB-203ENST00000463370 ITGA2P17301 1181 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 KHKP50053 298 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 RPP38P78345 283 aaKnown RBP12.04□□□□□ -0.48
VAPB-203ENST00000463370 KCNC4Q03721 635 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 SRSF5Q13243 272 aaKnown RBP12.04□□□□□ -0.48
VAPB-203ENST00000463370 KEAP1Q14145 624 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 RBM48Q5RL73 367 aaKnown RBP12.04□□□□□ -0.48
VAPB-203ENST00000463370 XAF1Q6GPH4 301 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 ABHD13Q7L211 337 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 B3GNT8Q7Z7M8 397 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 ARL14Q8N4G2 192 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 AVL9Q8NBF6 648 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 HSPA12BQ96MM6 686 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 OR7D2Q96RA2 312 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 RASSF1Q9NS23 344 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 GIMAP4Q9NUV9 329 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 CDC14AQ9UNH5 594 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 MRPS17Q9Y2R5 130 aaKnown RBP12.04□□□□□ -0.48
VAPB-203ENST00000463370 NAALAD2Q9Y3Q0 740 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 PTGES3LE9PB15 166 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 EMC8O43402 210 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 GADD45GO95257 159 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 ZIC2O95409 532 aaPredicted RBP12.04□□□□□ -0.48
VAPB-203ENST00000463370 RHCEP18577 417 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 BCKDHBP21953 392 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 NUDT1P36639 197 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 RAB39AQ14964 217 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 DEF8Q6ZN54 512 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 NLGN4XQ8N0W4 816 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 LRRC25Q8N386 305 aaPredicted RBP12.04□□□□□ -0.48
VAPB-203ENST00000463370 OR56A1Q8NGH5 318 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 PROX1Q92786 737 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 THAP11Q96EK4 314 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 ZNF354BQ96LW1 612 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 GABARAPL3Q9BY60 117 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 DDX18Q9NVP1 670 aaKnown RBP12.04□□□□□ -0.48
VAPB-203ENST00000463370 KCND3Q9UK17 655 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 FAM32AQ9Y421 112 aaKnown RBP12.04□□□□□ -0.48
VAPB-203ENST00000463370 PCDHGA6Q9Y5G7 932 aa12.04□□□□□ -0.48
VAPB-203ENST00000463370 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 SGK494L7N484 410 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 PCDHGA12O60330 932 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 UBXN7O94888 489 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 MED26O95402 600 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 RXRGP48443 463 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 HMGA2P52926 109 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 PRR5P85299 388 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 SHC2P98077 582 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 IL18R1Q13478 541 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 SEC23BQ15437 767 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.03□□□□□ -0.48
VAPB-203ENST00000463370 GPR141Q7Z602 305 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 SPARTQ8N0X7 666 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 OR4K14Q8NGD5 310 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 MIPOL1Q8TD10 442 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 GTPBP3Q969Y2 492 aaKnown RBP12.03□□□□□ -0.48
VAPB-203ENST00000463370 ZNF607Q96SK3 696 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 NMNAT1Q9HAN9 279 aaPredicted RBP12.03□□□□□ -0.48
VAPB-203ENST00000463370 FANCEQ9HB96 536 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 PAPOLBQ9NRJ5 636 aaKnown RBP12.03□□□□□ -0.48
VAPB-203ENST00000463370 WNT16Q9UBV4 365 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 PHF11Q9UIL8 331 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 PSME2Q9UL46 239 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 FRYLO94915 3013 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 URADA6NGE7 173 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 SLC9B1P1A6NJY1 282 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 CYR61O00622 381 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 ZSCAN9O15535 394 aaPredicted RBP12.03□□□□□ -0.48
VAPB-203ENST00000463370 FGF17O60258 216 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 GALR3O60755 368 aaPredicted RBP12.03□□□□□ -0.48
VAPB-203ENST00000463370 ANGPTL1O95841 491 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 GASTP01350 101 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 DCNP07585 359 aaKnown RBP12.03□□□□□ -0.48
VAPB-203ENST00000463370 FOSL2P15408 326 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 CRISP3P54108 245 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 RACK1P63244 317 aaKnown RBP12.03□□□□□ -0.48
VAPB-203ENST00000463370 RELAQ04206 551 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 CHRNEQ04844 493 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 DMWDQ09019 674 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 DEFB133Q30KQ1 61 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 ZBED5Q49AG3 693 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 GPAT3Q53EU6 434 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 TRMT12Q53H54 448 aaKnown RBP12.03□□□□□ -0.48
VAPB-203ENST00000463370 FAM92BQ6ZTR7 304 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 CLVS1Q8IUQ0 354 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms