RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 STARD6P59095 220 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 OLR1P78380 273 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 SIM1P81133 766 aaPredicted RBP23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 VANGL1Q8TAA9 524 aaPredicted RBP23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 COL26A1Q96A83 441 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 ALPK1Q96QP1 1244 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 OR7D2Q96RA2 312 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 TUBA1CQ9BQE3 449 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 RSPO3Q9BXY4 272 aaPredicted RBP23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 PCED1AQ9H1Q7 454 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 SEMA6CQ9H3T2 930 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 FANCEQ9HB96 536 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 CCDC88CQ9P219 2028 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 POMT2Q9UKY4 750 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 DOLKQ9UPQ8 538 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 SNX5Q9Y5X3 404 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 SPACA6W5XKT8 324 aa23.2■■□□□ 1.3
DNMT3A-206ENST00000406659 A0A0G2JPF8 293 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 A0A1W2PPC1 479 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 A0A1W2PR77 199 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 ZNF860A6NHJ4 632 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 HNRNPCL2B2RXH8 293 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 HNRNPCL3B7ZW38 293 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 PTGES3LE9PB15 166 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 CHRM4P08173 479 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 HNRNPCL4P0DMR1 293 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 MAZP56270 477 aaKnown RBP23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 NUP107P57740 925 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 VSX2P58304 361 aaPredicted RBP23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 FOXD4Q12950 439 aaPredicted RBP23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 LSAMPQ13449 338 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 COLEC12Q5KU26 742 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 GPR153Q6NV75 609 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 GKN2Q86XP6 184 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 ALDH16A1Q8IZ83 802 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 CADM4Q8NFZ8 388 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 LMX1AQ8TE12 382 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 SGCDQ92629 289 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 MPP4Q96JB8 637 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 HRASLS5Q96KN8 279 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 CSF3RQ99062 836 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 NELL2Q99435 816 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 PSD2Q9BQI7 771 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 WNT16Q9UBV4 365 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 KCND3Q9UK17 655 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 E9PQ18 207 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 TLR4O00206 839 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 CPNE6O95741 557 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 IL9P15248 144 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 NME1P15531 152 aaKnown RBP23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 MAOBP27338 520 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 FMO3P31513 532 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 MAD2L1BPQ15013 274 aaPredicted RBP23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 PRAMEF8Q5VWM4 474 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 PRAMEF7Q5VXH5 474 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 DEF8Q6ZN54 512 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 B3GNT8Q7Z7M8 397 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 OR4N5Q8IXE1 308 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 TMEFF1Q8IYR6 380 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 SPARTQ8N0X7 666 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 AVL9Q8NBF6 648 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 OR9Q2Q8NGE9 314 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 ACTRT3Q9BYD9 372 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 ANKRA2Q9H9E1 313 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 SCN3BQ9NY72 215 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 TMCC3Q9ULS5 477 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 TPRKBQ9Y3C4 175 aa23.19■■□□□ 1.3
DNMT3A-206ENST00000406659 SOX1O00570 391 aaPredicted RBP23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 FFAR1O14842 300 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 CDH3P22223 829 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 CXCR4P61073 352 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 FUT5Q11128 374 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 ATAD3BQ5T9A4 648 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 KLHL35Q6PF15 583 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 OLIG3Q7RTU3 272 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 IQCHQ86VS3 1027 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 GJD3Q8N144 294 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 NODALQ96S42 347 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 NIPSNAP1Q9BPW8 284 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 BTBD2Q9BX70 525 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 MIR1-1HGQ9H1L0 117 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 KCNE3Q9Y6H6 103 aa23.18■■□□□ 1.3
DNMT3A-206ENST00000406659 ASNA1O43681 348 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 XPNPEP2O43895 674 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 UBXN7O94888 489 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 ST6GAL1P15907 406 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 SLC5A2P31639 672 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 RACK1P63244 317 aaKnown RBP23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 RPL6Q02878 288 aaKnown RBP23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 C6orf132Q5T0Z8 1188 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 USP53Q70EK8 1073 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 PRSS41Q7RTY9 318 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 CHRDQ9H2X0 955 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 NMNAT1Q9HAN9 279 aaPredicted RBP23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 DNAAF2Q9NVR5 837 aaKnown RBP23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 CALML5Q9NZT1 146 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 AASSQ9UDR5 926 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 LIPT1Q9Y234 373 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 NAALAD2Q9Y3Q0 740 aa23.17■■□□□ 1.3
DNMT3A-206ENST00000406659 TRIOBPQ9H2D6 2365 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms