RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 SRRQ9GZT4 340 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TP63Q9H3D4 680 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MVB12BQ9H7P6 319 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 LHX9Q9NQ69 397 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TAC3Q9UHF0 121 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ZNF221Q9UK13 617 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 HCN2Q9UL51 889 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 DIMT1Q9UNQ2 313 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PRAMEF27A3QJZ7 478 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TLX2O43763 284 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PRKYO43930 277 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 NME6O75414 186 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 RHOP08100 348 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ERGP11308 486 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 CXCR2P25025 360 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 CCT3P49368 545 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ST8SIA6P61647 398 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 COX10Q12887 443 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 LARS2Q15031 903 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TBC1D19Q8N5T2 526 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 IQCF1Q8N6M8 205 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 SLC25A46Q96AG3 418 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 EXOSC8Q96B26 276 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 QRFPRQ96P65 431 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 NEDD4LQ96PU5 975 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PELI2Q9HAT8 420 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TVP23BQ9NYZ1 205 aa13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PCYT1BQ9Y5K3 369 aaPredicted RBP13.44□□□□□ -0.26
CDK5RAP3-237ENST00000585163 SLC28A2O43868 658 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 VEGFDO43915 354 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TGM4P49221 684 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 SYPL1Q16563 259 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 SMUG1Q53HV7 270 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 SYT14P1Q58G82 188 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ARMC4Q5T2S8 1044 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PODNL1Q6PEZ8 512 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 COMTD1Q86VU5 262 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MMAAQ8IVH4 418 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ARRDC3Q96B67 414 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ZSWIM3Q96MP5 696 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 NRTNQ99748 197 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TPK1Q9H3S4 243 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 WASH6PQ9NQA3 447 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ACSS1Q9NUB1 689 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 CUEDC1Q9NWM3 386 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 P2RX2Q9UBL9 471 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TESQ9UGI8 421 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 CMAHPQ9Y471 501 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 FAM47E-STBD1D6RA91 191 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TMPRSS11DO60235 418 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 LZTS3O60299 673 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 LGI1O95970 557 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 IL1AP01583 271 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 IL7P13232 177 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ARHGAP19Q14CB8 494 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 DHCR24Q15392 516 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ATAD3CQ5T2N8 411 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ZNF517Q6ZMY9 492 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 USP30Q70CQ3 517 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ZER1Q7Z7L7 766 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 NUDT13Q86X67 352 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 FAM181AQ8N9Y4 354 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 OR52I1Q8NGK6 324 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TFGQ92734 400 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 FGF11Q92914 225 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TXNL4BQ9NX01 149 aaKnown RBP13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PRKAB1Q9Y478 270 aa13.43□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PLD2O14939 933 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 LINC00271P0C7V0 271 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 OR12D1P0DN82 309 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 CPEP16870 476 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TCEA1P23193 301 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MMP11P24347 488 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 GIPRP48546 466 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 EFNB1P98172 346 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 BNC1Q01954 994 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 RPA4Q13156 261 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MLC1Q15049 377 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 NDUFA9Q16795 377 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PEX5LQ8IYB4 626 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TP53INP1Q96A56 240 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 OR2B2Q9GZK3 357 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MAN2C1Q9NTJ4 1040 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TEX10Q9NXF1 929 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MKI67P46013 3256 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 NOTCH4Q99466 2003 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 FEZF1A0PJY2 475 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 M0R3H8 397 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 AP3D1O14617 1153 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 CDRT1O95170 752 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 RAB36O95755 333 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 CCR8P51685 355 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PRMT2P55345 433 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 GINS1Q14691 196 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 GLYR1Q49A26 553 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 KIAA1211LQ6NV74 962 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 RAB43Q86YS6 212 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 LINC00471Q8N535 108 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 CLDN22Q8N7P3 220 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PSD4Q8NDX1 1056 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms