RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 TSC22D4Q9Y3Q8 395 aa13.03□□□□□ -0.32
SHOX-202ENST00000381575 TNPO3Q9Y5L0 923 aaKnown RBP13.03□□□□□ -0.32
SHOX-202ENST00000381575 CHCHD2Q9Y6H1 151 aaPredicted RBP13.03□□□□□ -0.32
SHOX-202ENST00000381575 ABCA4P78363 2273 aa13.02□□□□□ -0.32
SHOX-202ENST00000381575 TRGV5A0A0B4J1U4 118 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 A0A1B0GVC2 190 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 FIGNL2A6NMB9 653 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 POC1B-GALNT4F8VUJ3 575 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 PPP6CO00743 305 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 AQP7O14520 342 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 BCKDKO14874 412 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 UGDHO60701 494 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 KLK1P06870 262 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 INHBAP08476 426 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 FBXO45P0C2W1 286 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 IGFBP2P18065 325 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 MSX1P28360 303 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 ADH7P40394 386 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 FBXW4P57775 412 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 CUL3Q13618 768 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 SNTB1Q13884 538 aaKnown RBP13.02□□□□□ -0.33
SHOX-202ENST00000381575 TTC19Q6DKK2 380 aaPredicted RBP13.02□□□□□ -0.33
SHOX-202ENST00000381575 OR52E8Q6IFG1 317 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 B3GNT6Q6ZMB0 384 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 ACAD11Q709F0 780 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 CDH24Q86UP0 819 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 PRR22Q8IZ63 422 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 WDR41Q9HAD4 459 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 MCCC2Q9HCC0 563 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 FARSBQ9NSD9 589 aaKnown RBP13.02□□□□□ -0.33
SHOX-202ENST00000381575 CNOT11Q9UKZ1 510 aaKnown RBP13.02□□□□□ -0.33
SHOX-202ENST00000381575 ZFHX3Q15911 3703 aa13.02□□□□□ -0.33
SHOX-202ENST00000381575 A0A0G2JNJ9 132 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 OR14I1A6ND48 311 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 KDM4EB2RXH2 506 aaPredicted RBP13.01□□□□□ -0.33
SHOX-202ENST00000381575 TRIM49D1C9J1S8 452 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 FOXE1O00358 373 aaPredicted RBP13.01□□□□□ -0.33
SHOX-202ENST00000381575 SLC35E2P0CK97 266 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 PIK3R1P27986 724 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 MAGEA12P43365 314 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 WNT3P56703 355 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 NNATQ16517 81 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 HYAL4Q2M3T9 481 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 C1orf185Q5T7R7 199 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 FRG2Q64ET8 278 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 LIX1LQ8IVB5 337 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 ZNF592Q92610 1267 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 FRG2BQ96QU4 278 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 HBEGFQ99075 208 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 SERPINI1Q99574 410 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 PELOQ9BRX2 385 aaKnown RBP13.01□□□□□ -0.33
SHOX-202ENST00000381575 DOHHQ9BU89 302 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 CXorf21Q9HAI6 301 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 ZFP64Q9NPA5 681 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHOX-202ENST00000381575 Q9UFV3 132 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 MTRF1LQ9UGC7 380 aaKnown RBP13.01□□□□□ -0.33
SHOX-202ENST00000381575 BOKQ9UMX3 212 aaPredicted RBP13.01□□□□□ -0.33
SHOX-202ENST00000381575 DTX4Q9Y2E6 619 aa13.01□□□□□ -0.33
SHOX-202ENST00000381575 C2orf92A0A1B0GVN3 265 aa13□□□□□ -0.33
SHOX-202ENST00000381575 CCDC189A1A4V9 331 aa13□□□□□ -0.33
SHOX-202ENST00000381575 SUSD5O60279 629 aa13□□□□□ -0.33
SHOX-202ENST00000381575 SMIM24O75264 130 aa13□□□□□ -0.33
SHOX-202ENST00000381575 SEMA3DO95025 777 aa13□□□□□ -0.33
SHOX-202ENST00000381575 GDF1P27539 372 aa13□□□□□ -0.33
SHOX-202ENST00000381575 SERPINB3P29508 390 aa13□□□□□ -0.33
SHOX-202ENST00000381575 ARFIP1P53367 373 aa13□□□□□ -0.33
SHOX-202ENST00000381575 CDH13P55290 713 aa13□□□□□ -0.33
SHOX-202ENST00000381575 BIKQ13323 160 aa13□□□□□ -0.33
SHOX-202ENST00000381575 NTRK2Q16620 822 aa13□□□□□ -0.33
SHOX-202ENST00000381575 WLSQ5T9L3 541 aa13□□□□□ -0.33
SHOX-202ENST00000381575 DESI1Q6ICB0 168 aa13□□□□□ -0.33
SHOX-202ENST00000381575 FAM180BQ6P0A1 224 aa13□□□□□ -0.33
SHOX-202ENST00000381575 LETMD1Q6P1Q0 360 aa13□□□□□ -0.33
SHOX-202ENST00000381575 GALNT12Q8IXK2 581 aa13□□□□□ -0.33
SHOX-202ENST00000381575 DMRTC2Q8IXT2 367 aaPredicted RBP13□□□□□ -0.33
SHOX-202ENST00000381575 SLC15A4Q8N697 577 aa13□□□□□ -0.33
SHOX-202ENST00000381575 ZNF441Q8N8Z8 693 aa13□□□□□ -0.33
SHOX-202ENST00000381575 OR4F6Q8NGB9 312 aa13□□□□□ -0.33
SHOX-202ENST00000381575 DCAKDQ8WVC6 231 aa13□□□□□ -0.33
SHOX-202ENST00000381575 NRGNQ92686 78 aa13□□□□□ -0.33
SHOX-202ENST00000381575 DIO2Q92813 273 aa13□□□□□ -0.33
SHOX-202ENST00000381575 ISL2Q96A47 359 aa13□□□□□ -0.33
SHOX-202ENST00000381575 SARAFQ96BY9 339 aa13□□□□□ -0.33
SHOX-202ENST00000381575 SLC12A4Q9UP95 1085 aa13□□□□□ -0.33
SHOX-202ENST00000381575 ACANP16112 2415 aa13□□□□□ -0.33
SHOX-202ENST00000381575 OR6C76A6NM76 312 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 STX16-NPEPL1H3BU86 382 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 STX16O14662 325 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 RPS17P08708 135 aaKnown RBP12.99□□□□□ -0.33
SHOX-202ENST00000381575 RBP1P09455 135 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 NT5EP21589 574 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 ECHS1P30084 290 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 ZFP36L2P47974 494 aaKnown RBP12.99□□□□□ -0.33
SHOX-202ENST00000381575 XKP51811 444 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 DUSP2Q05923 314 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 IFT88Q13099 833 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 MYBPHQ13203 477 aa12.99□□□□□ -0.33
SHOX-202ENST00000381575 EXOSC7Q15024 291 aaKnown RBP12.99□□□□□ -0.33
SHOX-202ENST00000381575 TCHHL1Q5QJ38 904 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms