RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 LTN1O94822 1766 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 GXYLT2A0PJZ3 443 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 M0R129 80 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 TBX10O75333 385 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 RFPL1O75677 317 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 FASLGP48023 281 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 E2F1Q01094 437 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 TUBA3CQ13748 450 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 SERTAD2Q14140 314 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 GTF2IRD2BQ6EKJ0 949 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 GTF2IRD2Q86UP8 949 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 ZNF709Q8N972 641 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 CLEC1AQ8NC01 280 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 BOCQ9BWV1 1114 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 TUBA8Q9NY65 449 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-202ENST00000342494 ETAA1Q9NY74 926 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 MKLN1Q9UL63 735 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 FXYD6-FXYD2A0A087WZ82 144 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 A0A1B0GVC2 190 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 SMIM30A4D0T7 59 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 TMX2-CTNND1H3BSU7 103 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 J3QRK9 145 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 BRINP1O60477 761 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 CDH15P55291 814 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 MAMDC2Q7Z304 686 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-202ENST00000342494 OR8S1Q8NH09 359 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 ZNF559Q9BR84 538 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 URM1Q9BTM9 101 aaKnown RBP14.31□□□□□ -0.12
UBE3B-202ENST00000342494 FXYD6Q9H0Q3 95 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 RBMXP38159 391 aaKnown RBP14.31□□□□□ -0.12
UBE3B-202ENST00000342494 EIF2S3P41091 472 aaKnown RBP14.31□□□□□ -0.12
UBE3B-202ENST00000342494 POU3F4P49335 361 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 EMP2P54851 167 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 BNIP3Q12983 259 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 HNRNPA1L2Q32P51 320 aaKnown RBP14.31□□□□□ -0.12
UBE3B-202ENST00000342494 EEF1A1P5Q5VTE0 462 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 PPP1R14BQ96C90 147 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 CDH20Q9HBT6 801 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 RBMX2Q9Y388 322 aaKnown RBP14.31□□□□□ -0.12
UBE3B-202ENST00000342494 LRRC42Q9Y546 428 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 ALG5Q9Y673 324 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 PEAK1Q9H792 1746 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 CELP19835 753 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 THBS2P35442 1172 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 NUDT1P36639 197 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 ADH7P40394 386 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 EXOC3L2Q2M3D2 409 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 TRMT10AQ8TBZ6 339 aaKnown RBP14.31□□□□□ -0.12
UBE3B-202ENST00000342494 ZUFSPQ96AP4 578 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 TMEM68Q96MH6 324 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 KATNBL1Q9H079 304 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 KCNK12Q9HB15 430 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 SEC14L4Q9UDX3 406 aa14.31□□□□□ -0.12
UBE3B-202ENST00000342494 XRN1Q8IZH2 1706 aaKnown RBP14.31□□□□□ -0.12
UBE3B-202ENST00000342494 PEX14O75381 377 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 CER1O95813 267 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 SLC35E2BP0CK96 405 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ZNF28P17035 718 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 S100A1P23297 94 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ITGB7P26010 798 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 CLDN2P57739 230 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 CHCHD4Q8N4Q1 142 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 NPWQ8N729 165 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 SFXN2Q96NB2 322 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 DUSP23Q9BVJ7 150 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 RNF6Q9Y252 685 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 MYOM1P52179 1685 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 SCAMP2O15127 329 aaKnown RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ABCB7O75027 752 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 SLC16A8O95907 504 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ARL3P36405 182 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 MAGEA12P43365 314 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 RIDAP52758 137 aaKnown RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 HSD17B12Q53GQ0 312 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ARHGAP12Q8IWW6 846 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 SLC5A8Q8N695 610 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 HOXB13Q92826 284 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 PELI2Q9HAT8 420 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 RXFP3Q9NSD7 469 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 PTRH2Q9Y3E5 179 aaKnown RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 XPNPEP2O43895 674 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ZNF12P17014 697 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ZNF43P17038 809 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 TUBA1BP68363 451 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 TUBA4AP68366 448 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ZBED5Q49AG3 693 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 TUBA1AQ71U36 451 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 MRPL43Q8N983 215 aaKnown RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 OR6C4Q8NGE1 309 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 OR5AR1Q8NGP9 310 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 WACQ9BTA9 647 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ACTR10Q9NZ32 417 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ANHXE9PGG2 379 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 SDHDO14521 159 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 CFL1P23528 166 aaKnown RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 SNU13P55769 128 aaKnown RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ARF3P61204 181 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ARF1P84077 181 aaKnown RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 TCEAL1Q15170 157 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 GRK1Q15835 563 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms