RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 CD247P20963 164 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 NR4A1P22736 598 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 HMGA2P52926 109 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 CXCR4P61073 352 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 SLC35A2P78381 396 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 RGS1Q08116 209 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 TGM3Q08188 693 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 KIR2DS3Q14952 304 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 DEFB134Q4QY38 66 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 TCTN3Q6NUS6 607 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 ASPGQ86U10 573 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 P3H2Q8IVL5 708 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 MAFAQ8NHW3 353 aaPredicted RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 FAM81AQ8TBF8 368 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 ZCCHC10Q8TBK6 192 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 COL26A1Q96A83 441 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 TOE1Q96GM8 510 aaKnown RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 DOK1Q99704 481 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 WFDC6Q9BQY6 131 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 GABARAPL3Q9BY60 117 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 DUSP21Q9H596 190 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 NMNAT1Q9HAN9 279 aaPredicted RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 AMBNQ9NP70 447 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 EQTNQ9NQ60 294 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 NPDC1Q9NQX5 325 aaPredicted RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 SEMA3GQ9NS98 782 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 CES1P1Q9UKY3 287 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 HCN4Q9Y3Q4 1203 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 MYO15AQ9UKN7 3530 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 FAM20BO75063 409 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 WBP4O75554 376 aaKnown RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 CCNB2O95067 398 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 GASTP01350 101 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 EIF2S1P05198 315 aaKnown RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 IGHV4-34P06331 123 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 UGT2B7P16662 529 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 PCMT1P22061 227 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 PPP2R1BP30154 601 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 KRT20P35900 424 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 TSFMP43897 325 aaKnown RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 DGKEP52429 567 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 TUBA3CQ13748 450 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 COLEC12Q5KU26 742 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 BHLHB9Q6PI77 547 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 DEF8Q6ZN54 512 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 CCDC81Q6ZN84 652 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 ZNF605Q86T29 641 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 ZNF761Q86XN6 746 aaPredicted RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 AQP11Q8NBQ7 271 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 OR9A2Q8NGT5 310 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 FLVCR1-AS1Q8TAF5 88 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 APOBEC4Q8WW27 367 aaKnown RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 C16orf58Q96GQ5 468 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 OR2A5Q96R48 311 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 PITX2Q99697 317 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 ACTR10Q9NZ32 417 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 RNF6Q9Y252 685 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 POFUT2Q9Y2G5 429 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 HS3ST3A1Q9Y663 406 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 ZNF780BQ9Y6R6 833 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 TRBV4-1A0A0J9YWV2 114 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 OR2A25A4D2G3 310 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 PRAMEF26H0Y7S4 382 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 FOXD2O60548 495 aaPredicted RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 ZBTB11O95625 1053 aaPredicted RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 TNFP01375 233 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 CELA2BP08218 269 aaPredicted RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 CDK4P11802 303 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 PVRP15151 417 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 ZNF182P17025 639 aaPredicted RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 JUNDP17535 347 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 MC3RP41968 323 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 MAP2K4P45985 399 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 RABIFP47224 123 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 LIMS1P48059 325 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 KCNJ5P48544 419 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 ARFIP1P53367 373 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 CRISP3P54108 245 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 TMBIM6P55061 237 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 NUP107P57740 925 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 C1orf61Q13536 156 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 AHSA2Q719I0 299 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 OR4D11Q8NGI4 311 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 APH1BQ8WW43 257 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 RLN3Q8WXF3 142 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 GAL3ST3Q96A11 431 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 CNDP2Q96KP4 475 aaKnown RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 ZNF354BQ96LW1 612 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 FUNDC2Q9BWH2 189 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 GPR174Q9BXC1 333 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 POLMQ9NP87 494 aaPredicted RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 TIMMDC1Q9NPL8 285 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 GIMAP4Q9NUV9 329 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 C2orf42Q9NWW7 574 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 ZSCAN32Q9NX65 697 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 USP36Q9P275 1121 aaKnown RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 CPNE7Q9UBL6 633 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 PSME2Q9UL46 239 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 NAALAD2Q9Y3Q0 740 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 LOC105369274A0A096LPK9 316 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms