RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 ZFP64Q9NPA5 681 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 CD274Q9NZQ7 290 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 COPS7AQ9UBW8 275 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 CNOT11Q9UKZ1 510 aaKnown RBP8.52□□□□□ -1.05
CNOT9-202ENST00000295701 CBLCQ9ULV8 474 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 ERVK-19Q9WJR5 959 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 CHCHD2Q9Y6H1 151 aaPredicted RBP8.52□□□□□ -1.05
CNOT9-202ENST00000295701 HEATR5AQ86XA9 2040 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 PCNX3Q9H6A9 2034 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 ARID1AO14497 2285 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 ANK3Q12955 4377 aaKnown RBP8.52□□□□□ -1.05
CNOT9-202ENST00000295701 GLOD5A6NK44 160 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 A6NNC1 897 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 HSPB2A8KAH6 182 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 DYRK3O43781 588 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 FAM155BO75949 473 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 SEC31AO94979 1220 aaKnown RBP8.51□□□□□ -1.05
CNOT9-202ENST00000295701 EPPINO95925 133 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 C1QAP02745 245 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 GABRA1P14867 456 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 CEACAM8P31997 349 aaPredicted RBP8.51□□□□□ -1.05
CNOT9-202ENST00000295701 CASP2P42575 452 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 SSR2P43308 183 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 ZNF136P52737 540 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 DGKQP52824 942 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 SLC12A2P55011 1212 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 POU4F1Q01851 419 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 TGM3Q08188 693 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 DUSP8Q13202 625 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 DDX39BQ13838 428 aaKnown RBP8.51□□□□□ -1.05
CNOT9-202ENST00000295701 HSPB2Q16082 182 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 HIST2H2ACQ16777 129 aaPredicted RBP8.51□□□□□ -1.05
CNOT9-202ENST00000295701 ACSF3Q4G176 576 aaPredicted RBP8.51□□□□□ -1.05
CNOT9-202ENST00000295701 FLYWCH1Q4VC44 716 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 COX20Q5RI15 118 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 DEPDC1Q5TB30 811 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 HIST2H2AA3Q6FI13 130 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 PLXDC2Q6UX71 529 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 LRRC25Q8N386 305 aaPredicted RBP8.51□□□□□ -1.05
CNOT9-202ENST00000295701 TCAIMQ8N3R3 496 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 BBOF1Q8ND07 529 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 CHDHQ8NE62 594 aaPredicted RBP8.51□□□□□ -1.05
CNOT9-202ENST00000295701 WFDC11Q8NEX6 87 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 OR7G3Q8NG95 312 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 GOT1L1Q8NHS2 421 aaPredicted RBP8.51□□□□□ -1.05
CNOT9-202ENST00000295701 NUBPLQ8TB37 319 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 SLC22A8Q8TCC7 542 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 RNASE6Q93091 150 aaKnown RBP8.51□□□□□ -1.05
CNOT9-202ENST00000295701 RMND5BQ96G75 393 aaPredicted RBP8.51□□□□□ -1.05
CNOT9-202ENST00000295701 GAL3ST4Q96RP7 486 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 KRT12Q99456 494 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 TIMP4Q99727 224 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 EFCAB11Q9BUY7 163 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 CD244Q9BZW8 370 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 RPF2Q9H7B2 306 aaKnown RBP8.51□□□□□ -1.05
CNOT9-202ENST00000295701 CNOT10Q9H9A5 744 aaKnown RBP8.51□□□□□ -1.05
CNOT9-202ENST00000295701 POPDC3Q9HBV1 291 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 ACKR4Q9NPB9 350 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 BOKQ9UMX3 212 aaPredicted RBP8.51□□□□□ -1.05
CNOT9-202ENST00000295701 SNX24Q9Y343 169 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 SLC6A5Q9Y345 797 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 ABCA2Q9BZC7 2435 aa8.51□□□□□ -1.05
CNOT9-202ENST00000295701 C15orf38-AP3S2A0A0A6YYH1 394 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 IQANK1A0A1B0GTG1 560 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 LRRC14BA6NHZ5 514 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 E7ESA3 106 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 UBXN8O00124 270 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 CES2O00748 559 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 PLPP1O14494 284 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 PGRMC2O15173 223 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 TRIM3O75382 744 aaPredicted RBP8.5□□□□□ -1.05
CNOT9-202ENST00000295701 EEDO75530 441 aaKnown RBP8.5□□□□□ -1.05
CNOT9-202ENST00000295701 SCELO95171 688 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 COX7A2P14406 83 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 ALOX15P16050 662 aaPredicted RBP8.5□□□□□ -1.05
CNOT9-202ENST00000295701 TACR1P25103 407 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 GDF1P27539 372 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 SSTR4P31391 388 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 HPDP32754 393 aaPredicted RBP8.5□□□□□ -1.05
CNOT9-202ENST00000295701 SOX18P35713 384 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 RPL21P46778 160 aaKnown RBP8.5□□□□□ -1.05
CNOT9-202ENST00000295701 ASCL1P50553 236 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 SLC37A1P57057 533 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 FBXW4P57775 412 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 DR1Q01658 176 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 CRYZQ08257 329 aaKnown RBP8.5□□□□□ -1.05
CNOT9-202ENST00000295701 LAPTM5Q13571 262 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 E2F2Q14209 437 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 TBCCQ15814 346 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 NTRK2Q16620 822 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 EIPR1Q53HC9 387 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 PAGE2BQ5JRK9 111 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 DCST1Q5T197 706 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 FNDC7Q5VTL7 733 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 KHDRBS2Q5VWX1 349 aaKnown RBP8.5□□□□□ -1.05
CNOT9-202ENST00000295701 MED27Q6P2C8 311 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 GPR180Q86V85 440 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 CREG2Q8IUH2 290 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 LAS2Q8IYD9 372 aa8.5□□□□□ -1.05
CNOT9-202ENST00000295701 ZBED8Q8IZ13 594 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms