RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 PSD4Q8NDX1 1056 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.48□□□□□ -1.697e-31■■□□□ 11.6
RAP1B-201ENST00000250559 ARRDC2Q8TBH0 407 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 MYRFLQ96LU7 910 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 VDAC3Q9Y277 283 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 NPIPA5E9PKD4 350 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 PRODHO43272 600 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 HEXBP07686 556 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 ENDOUP21128 410 aaKnown RBP4.48□□□□□ -1.69
RAP1B-201ENST00000250559 FPR1P21462 350 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 RORCP51449 518 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 HOXC5Q00444 222 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 ANKDD1AQ495B1 522 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 OGFRL1Q5TC84 451 aaPredicted RBP4.48□□□□□ -1.69
RAP1B-201ENST00000250559 DPY19L2P1Q6NXN4 242 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 PGBD2Q6P3X8 592 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 KCNE4Q8WWG9 221 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 ZSWIM3Q96MP5 696 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 PTCHD1Q96NR3 888 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 SLC29A1Q99808 456 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 SLC12A9Q9BXP2 914 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 COL25A1Q9BXS0 654 aaPredicted RBP4.48□□□□□ -1.69
RAP1B-201ENST00000250559 HDHD5Q9BXW7 423 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 LHPPQ9H008 270 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 NARFLQ9H6Q4 476 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 NPIPA1Q9UND3 350 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 FAM171A2A8MVW0 826 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 CLDN25C9JDP6 229 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 PEPDP12955 493 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 GABRB3P28472 473 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 HOXC12P31275 282 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 ACVR1BP36896 505 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 ZCCHC12Q6PEW1 402 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 PEG10Q86TG7 708 aaKnown RBP4.48□□□□□ -1.69
RAP1B-201ENST00000250559 VRK3Q8IV63 474 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 KDM1BQ8NB78 822 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 OR2AJ1Q8NGZ0 328 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 TMCO6Q96DC7 493 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 CRELD1Q96HD1 420 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 EXTL2Q9UBQ6 330 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 CLEC4EQ9ULY5 219 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 NAALAD2Q9Y3Q0 740 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 LRRC42Q9Y546 428 aa4.48□□□□□ -1.69
RAP1B-201ENST00000250559 TMEM202A6NGA9 273 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 CTSAP10619 480 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 NTSR1P30989 418 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 SOX2P48431 317 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 RPP38P78345 283 aaKnown RBP4.47□□□□□ -1.69
RAP1B-201ENST00000250559 ZNF783Q6ZMS7 281 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 CYS1Q717R9 158 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 VRK2Q86Y07 508 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 TRAM1L1Q8N609 369 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 OR52E1Q8NGJ3 308 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 SHKBP1Q8TBC3 707 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 PTRH2Q9Y3E5 179 aaKnown RBP4.47□□□□□ -1.69
RAP1B-201ENST00000250559 MYH13Q9UKX3 1938 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 CIB4A0PJX0 185 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 H3BMQ9 156 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 HCRTR2O43614 444 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 PVRP15151 417 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 PORP16435 677 aaPredicted RBP4.47□□□□□ -1.69
RAP1B-201ENST00000250559 GGT1P19440 569 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 MC3RP41968 323 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 OLIG3Q7RTU3 272 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 COMMD6Q7Z4G1 85 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 PACRGLQ8N7B6 248 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 GOT1L1Q8NHS2 421 aaPredicted RBP4.47□□□□□ -1.69
RAP1B-201ENST00000250559 FANK1Q8TC84 345 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 COG8Q96MW5 612 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 APOOQ9BUR5 198 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 TAS2R7Q9NYW3 318 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 EIF3KQ9UBQ5 218 aaKnown RBP4.47□□□□□ -1.69
RAP1B-201ENST00000250559 IFNA6P05013 189 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 NDUFS1P28331 727 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 CAPZA1P52907 286 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 CLRN1P58418 232 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 SLC36A3Q495N2 470 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 KCTD11Q693B1 232 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 GTF2IRD2BQ6EKJ0 949 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 ADNP2Q6IQ32 1131 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 GTF2IRD2Q86UP8 949 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 MFSD6LQ8IWD5 586 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 GNPDA2Q8TDQ7 276 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 ZNF775Q96BV0 537 aaPredicted RBP4.47□□□□□ -1.69
RAP1B-201ENST00000250559 LAMP5Q9UJQ1 280 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 A0A1B0GVG6 124 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 IRGMA1A4Y4 181 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 SRPRAP08240 638 aaKnown RBP4.47□□□□□ -1.69
RAP1B-201ENST00000250559 KDELR2P33947 212 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 HSD17B2P37059 387 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 ZNF551Q7Z340 670 aaPredicted RBP4.47□□□□□ -1.69
RAP1B-201ENST00000250559 ZNF689Q96CS4 500 aaPredicted RBP4.47□□□□□ -1.69
RAP1B-201ENST00000250559 MKS1Q9NXB0 559 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 PGAP2Q9UHJ9 254 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 CACNA1SQ13698 1873 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 ZNF140P52738 457 aaPredicted RBP4.47□□□□□ -1.69
RAP1B-201ENST00000250559 ZNF517Q6ZMY9 492 aaPredicted RBP4.47□□□□□ -1.69
RAP1B-201ENST00000250559 GALNT7Q86SF2 657 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 DTWD1Q8N5C7 304 aa4.47□□□□□ -1.69
RAP1B-201ENST00000250559 DTWD2Q8NBA8 298 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms