RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A BCD1P38772 366 aa17.25■□□□□ 0.35
TRN1tP(UGG)A HUL4P40985 892 aa17.25■□□□□ 0.35
TRN1tP(UGG)A NBP1P52919 319 aaPredicted RBP17.25■□□□□ 0.35
TRN1tP(UGG)A VPS72Q03388 795 aa17.25■□□□□ 0.35
TRN1tP(UGG)A GFD1Q04839 188 aaKnown RBP17.25■□□□□ 0.35
TRN1tP(UGG)A YOL075CQ08234 1294 aa17.25■□□□□ 0.35
TRN1tP(UGG)A PCK1P10963 549 aa17.24■□□□□ 0.35
TRN1tP(UGG)A TAF13P11747 167 aa17.24■□□□□ 0.35
TRN1tP(UGG)A SDH2P21801 266 aa17.24■□□□□ 0.35
TRN1tP(UGG)A ADE17P38009 592 aaKnown RBP17.24■□□□□ 0.35
TRN1tP(UGG)A TOS3P43637 560 aa17.24■□□□□ 0.35
TRN1tP(UGG)A ACF4P47129 309 aa17.24■□□□□ 0.35
TRN1tP(UGG)A YML020WQ03722 664 aa17.24■□□□□ 0.35
TRN1tP(UGG)A DAL7P21826 554 aa17.23■□□□□ 0.35
TRN1tP(UGG)A YSC83P32792 385 aa17.23■□□□□ 0.35
TRN1tP(UGG)A YEL1P34225 687 aa17.23■□□□□ 0.35
TRN1tP(UGG)A MRPL10P36520 322 aa17.23■□□□□ 0.35
TRN1tP(UGG)A UBP13P38187 747 aa17.23■□□□□ 0.35
TRN1tP(UGG)A GUA1P38625 525 aaKnown RBP17.23■□□□□ 0.35
TRN1tP(UGG)A LCD1Q04377 747 aa17.23■□□□□ 0.35
TRN1tP(UGG)A TCO89Q08921 799 aa17.23■□□□□ 0.35
TRN1tP(UGG)A PSY4P38193 441 aa17.22■□□□□ 0.35
TRN1tP(UGG)A CUR1Q06469 252 aa17.22■□□□□ 0.35
TRN1tP(UGG)A CDC37P06101 506 aaKnown RBP17.21■□□□□ 0.35
TRN1tP(UGG)A AFT1P22149 690 aa17.21■□□□□ 0.35
TRN1tP(UGG)A COT1P32798 439 aa17.21■□□□□ 0.35
TRN1tP(UGG)A SAD1P43589 448 aa17.21■□□□□ 0.35
TRN1tP(UGG)A AIP1P46680 615 aaKnown RBP17.21■□□□□ 0.35
TRN1tP(UGG)A CAF130P53280 1122 aaPredicted RBP17.21■□□□□ 0.35
TRN1tP(UGG)A TPO2P53283 614 aa17.21■□□□□ 0.35
TRN1tP(UGG)A RTT102P53330 157 aa17.21■□□□□ 0.35
TRN1tP(UGG)A TRK2P28584 889 aa17.2■□□□□ 0.34
TRN1tP(UGG)A MRF1P30775 413 aaPredicted RBP17.2■□□□□ 0.34
TRN1tP(UGG)A WAR1Q03631 944 aa17.2■□□□□ 0.34
TRN1tP(UGG)A TMA16Q08687 178 aa17.2■□□□□ 0.34
TRN1tP(UGG)A PHO8P11491 566 aa17.19■□□□□ 0.34
TRN1tP(UGG)A SSD1P24276 1250 aaKnown RBP RIP-Chip data17.19■□□□□ 0.34not detected
TRN1tP(UGG)A MRC1P25588 1096 aa17.19■□□□□ 0.34
TRN1tP(UGG)A DUR3P33413 735 aa17.19■□□□□ 0.34
TRN1tP(UGG)A VPS35P34110 944 aa17.19■□□□□ 0.34
TRN1tP(UGG)A CCM1P48237 864 aaPredicted RBP17.19■□□□□ 0.34
TRN1tP(UGG)A TAM41P53230 385 aa17.19■□□□□ 0.34
TRN1tP(UGG)A IES4Q08561 116 aa17.19■□□□□ 0.34
TRN1tP(UGG)A HIF1Q12373 385 aa17.19■□□□□ 0.34
TRN1tP(UGG)A EBS1Q03466 884 aaKnown RBP17.18■□□□□ 0.34
TRN1tP(UGG)A YAP7Q08182 245 aa17.18■□□□□ 0.34
TRN1tP(UGG)A MED1Q12321 566 aa17.18■□□□□ 0.34
TRN1tP(UGG)A VPS13Q07878 3144 aa17.17■□□□□ 0.34
TRN1tP(UGG)A VID30P53076 958 aa17.17■□□□□ 0.34
TRN1tP(UGG)A PIB1Q06651 286 aa17.17■□□□□ 0.34
TRN1tP(UGG)A HFI1Q12060 488 aa17.17■□□□□ 0.34
TRN1tP(UGG)A OSW2Q12202 724 aa17.17■□□□□ 0.34
TRN1tP(UGG)A NAM7P30771 971 aaKnown RBP17.16■□□□□ 0.34
TRN1tP(UGG)A MSS51P32335 436 aa17.16■□□□□ 0.34
TRN1tP(UGG)A YNL146WP53906 100 aa17.16■□□□□ 0.34
TRN1tP(UGG)A SCP160P06105 1222 aaKnown RBP RIP-Chip data17.15■□□□□ 0.34not detected
TRN1tP(UGG)A MAK16P10962 306 aaPredicted RBP17.15■□□□□ 0.34
TRN1tP(UGG)A YET1P35723 206 aa17.15■□□□□ 0.34
TRN1tP(UGG)A MNN4P36044 1178 aa17.15■□□□□ 0.34
TRN1tP(UGG)A AZR1P50080 613 aa17.15■□□□□ 0.34
TRN1tP(UGG)A INP51P40559 946 aaKnown RBP17.14■□□□□ 0.33
TRN1tP(UGG)A CUS1Q02554 436 aaPredicted RBP17.14■□□□□ 0.33
TRN1tP(UGG)A YPR148CQ06523 435 aa17.14■□□□□ 0.33
TRN1tP(UGG)A RPC25P35718 212 aa17.13■□□□□ 0.33
TRN1tP(UGG)A CUL3P53202 744 aa17.13■□□□□ 0.33
TRN1tP(UGG)A VTC3Q02725 835 aa17.13■□□□□ 0.33
TRN1tP(UGG)A YDR090CQ03193 310 aa17.13■□□□□ 0.33
TRN1tP(UGG)A ECM30Q06673 1274 aa17.13■□□□□ 0.33
TRN1tP(UGG)A YDR524C-BQ3E6R4 66 aa17.13■□□□□ 0.33
TRN1tP(UGG)A WHI2P12611 486 aa17.12■□□□□ 0.33
TRN1tP(UGG)A MIC60P36112 540 aa17.12■□□□□ 0.33
TRN1tP(UGG)A SPT8P38915 602 aa17.12■□□□□ 0.33
TRN1tP(UGG)A UBP5P39944 805 aa17.12■□□□□ 0.33
TRN1tP(UGG)A MGA2P40578 1113 aa17.12■□□□□ 0.33
TRN1tP(UGG)A TFG2P41896 400 aaPredicted RBP17.12■□□□□ 0.33
TRN1tP(UGG)A JJJ3P47138 172 aa17.12■□□□□ 0.33
TRN1tP(UGG)A DPH2P32461 534 aa17.11■□□□□ 0.33
TRN1tP(UGG)A VID24P38263 362 aa17.11■□□□□ 0.33
TRN1tP(UGG)A COG4Q06096 861 aa17.11■□□□□ 0.33
TRN1tP(UGG)A MLH2Q07980 695 aa17.11■□□□□ 0.33
TRN1tP(UGG)A TMT1P32643 299 aa17.1■□□□□ 0.33
TRN1tP(UGG)A ALD5P40047 520 aaKnown RBP17.1■□□□□ 0.33
TRN1tP(UGG)A LCB2P40970 561 aa17.1■□□□□ 0.33
TRN1tP(UGG)A SGM1P47166 707 aa17.1■□□□□ 0.33
TRN1tP(UGG)A YPL034WQ03083 165 aa17.1■□□□□ 0.33
TRN1tP(UGG)A SPO75Q07798 868 aa17.1■□□□□ 0.33
TRN1tP(UGG)A CDC53Q12018 815 aaKnown RBP17.1■□□□□ 0.33
TRN1tP(UGG)A MSH3P25336 1018 aa17.09■□□□□ 0.33
TRN1tP(UGG)A ENV11P53246 860 aa17.09■□□□□ 0.33
TRN1tP(UGG)A HEM1P09950 548 aaPredicted RBP17.08■□□□□ 0.32
TRN1tP(UGG)A CHS2P14180 963 aa17.08■□□□□ 0.32
TRN1tP(UGG)A AVT3P36062 692 aa17.08■□□□□ 0.32
TRN1tP(UGG)A TVP23P38962 199 aa17.08■□□□□ 0.32
TRN1tP(UGG)A ORC5P50874 479 aa17.08■□□□□ 0.32
TRN1tP(UGG)A MNP1P53163 194 aaPredicted RBP17.08■□□□□ 0.32
TRN1tP(UGG)A TIM8P57744 87 aa17.08■□□□□ 0.32
TRN1tP(UGG)A MUD1P32605 298 aaKnown RBP17.07■□□□□ 0.32
TRN1tP(UGG)A SAP190P36123 1033 aa17.07■□□□□ 0.32
TRN1tP(UGG)A MIP6P38760 659 aaKnown RBP17.07■□□□□ 0.32
TRN1tP(UGG)A CTM1P38818 585 aa17.07■□□□□ 0.32
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms